| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1009 |
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| Symbol | |
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| ID | 6205730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 1242634 |
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| End bp | 1244331 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641690632 |
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| Product | TonB family protein |
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| Protein accession | YP_001817897 |
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| Protein GI | 182412831 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0137762 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCCGG GTCCCCGCTG GTTGCTCCGC TGTTGCGTGC CGCTGTTCGT GTTGGGCTGG
CTGTCGCTGA TGCTGGCGCA GGACGTGACG GTGGGCCCGA TCTCCTGGCT CGACGCAGAC
GACCCGCCGG ACCAGTTGCC CACGAGGAAA GCGGCGTTTC GCCCCGAATT TCCGGAGGAG
CTGAAGCAGA GCCCCGACCT CGGCTGGGCC ATGTTTGAGA TCTGGCTGAG CGACGATGGC
CGTAGCGTGC AGCTCGTCAC CTACGGCACG CAGCCGGCCT ATGCGGATGC GCTGGAGCAC
AGCTACGATG CCCGGCTGCG GTTCAAGCCG GGCAAGCGCG ACGGCCGCGC GGTGAACACC
CGGGTGCGCG TCACAGCGGT TTTCAACCCC GCCGGCGCTG CGCTGAAACG CGCTGACGCC
ACGCCGCGGT TGCTCGACGC GCAGGTGATC ATCGACCCGC GACAGAAACC CGAACGGCGC
GAACCGATGT GTTCCAATCG CACCGTTTGG GCGAACGTCC GCGTGCGCCC GAACGGCGAG
GCGACGCTTG CCGGCGGCGC GCCCGATGAA CTCGCCGACC TCCTGCGCGG GGCGCTGCCG
CAGTGGCGGT TTGCGCCGGC GCGGCGGGGC GGTCAGCCGG TGGAAGCGGA GCTGCGCGTG
CCGTTCATTG TCGTGCCGCC CGAGGCGACT TCGGGCGGGG AGCAGGTTCC GCCGAAGATC
CTGCAGGCCA CTTCGCCGCA TTATCCCTGG TCGATGCAGG CGAGCGGACT GCGCGGAGAC
GTGGTGGTGG AATTCGTCGT CGATTACGAG GGGCGCGTGC GCAAGCCGAT CGTGGTGCGC
ACGCTCAACC CGGGATTCAA CGCCGCGGCG ATCGAGGCGA TCAGCCGCTG GCGGTTCGAA
CCGGCCACGG TGCACGGCCG GCCAGTTAAT ACCCTCGTGC AACAGGGGAT TCGATTCGAA
CTGAGGGACG CACCCGGGGG CGGTTCCGAT GGGCTCGAGG TTAAACAGAA AGCCAACCTC
TCGAAGCTGC CGCCGGAGCT GCGCTACGAC ACGCCGCCGA AACTCACCAC CCTGGTGCAG
CCGAAATATC CCTACGCGCT CCTCCGCGAG GGCAAGCGCG GCACAGCCCA AGTAACGGTG
CTCGTGGGCG CGGATGGCCG CGTGCTCGAG GTGCGCGTGG CGAAGGCGCC GCAACCGGAG
TTGGGTTACG CACTCGAGGC AGCGGCGGAG ATGTTCGCAT TCCAGCCTGC GCTCAAAGGC
GGGCATCCCA TTCCGGCGAT GTATGGCTTC GAACACGACT TCGACCCGAG CGAACGCACG
CTCGTCCCCG AAAGCGACTG GGCGGCTTTG CGGCTCGAGC AGAAGCATCC CGAGGAGATT
CTTACCGCGA ACAAACTGGA CCAACCCATC AAGCCCGAGA CAACGAAGCC GCCGCGGTTT
CCCAGCAGCG TTCCGCAGGA GGTCGTGGAG GGCGAGGCGG TGGTCGAGGT GTTGATCGAC
CACAAGGGGC GCGTGTGTGT GCCGCGCGTG GTGTCGGCCT CGCTTCCCGA GTTCGGCTAC
GCGGCGGTCC AGGCGGTGGC CGAATGGCGG TTCGATCCAC CGACCAGCGG GGGCAAGCCC
GGCGCGGTGC GCGTGTCGGT GCCGTTTGCG TTCAAACGGC CTCCGCTCGC CGCGCCCGCC
TCGCCGCCCT CATCCTAA
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| Protein sequence | MSPGPRWLLR CCVPLFVLGW LSLMLAQDVT VGPISWLDAD DPPDQLPTRK AAFRPEFPEE
LKQSPDLGWA MFEIWLSDDG RSVQLVTYGT QPAYADALEH SYDARLRFKP GKRDGRAVNT
RVRVTAVFNP AGAALKRADA TPRLLDAQVI IDPRQKPERR EPMCSNRTVW ANVRVRPNGE
ATLAGGAPDE LADLLRGALP QWRFAPARRG GQPVEAELRV PFIVVPPEAT SGGEQVPPKI
LQATSPHYPW SMQASGLRGD VVVEFVVDYE GRVRKPIVVR TLNPGFNAAA IEAISRWRFE
PATVHGRPVN TLVQQGIRFE LRDAPGGGSD GLEVKQKANL SKLPPELRYD TPPKLTTLVQ
PKYPYALLRE GKRGTAQVTV LVGADGRVLE VRVAKAPQPE LGYALEAAAE MFAFQPALKG
GHPIPAMYGF EHDFDPSERT LVPESDWAAL RLEQKHPEEI LTANKLDQPI KPETTKPPRF
PSSVPQEVVE GEAVVEVLID HKGRVCVPRV VSASLPEFGY AAVQAVAEWR FDPPTSGGKP
GAVRVSVPFA FKRPPLAAPA SPPSS
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