| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0992 |
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| Symbol | |
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| ID | 6205615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 1219159 |
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| End bp | 1221957 |
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| Gene Length | 2799 bp |
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| Protein Length | 932 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641690615 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001817880 |
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| Protein GI | 182412814 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0295666 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0129496 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACACC CCGTGCTCCC GCGGTGCCTC GCACCCTTGC TCTCCTGCGC GGTTTTGCTC
ACCGCCCTCC TGGTCCTGCC TCACTCCCTC GCTGCGGCCG CCGCAGTTCC GGCCGCCGGC
CGCGAGCGAA TCCTCCTCGA CGCCGGCTGG CGGTTCGCAC TCGGTCACGC CACGGATCCC
GCGCGCGACT TCGGTCACGG CACCGGCTAC TTTTCCTATC TCGCCAAAAC CGGTTTCGGG
GACGGTGCCG CGAGTCCGGC GTTCGACGAC CGCACGTGGC GCCAGCTCGA CCTGCCGCAC
GACTGGGCCG TCGAAGTGCC GTTCGATCCG CGCGGCAGTC ACAGCCACGG CTACAAGGCG
GTCGGCCCGC GTTTCCCGGA GCGCAGCGTG GGCTGGTATC GTCGCAGCTT CCACGTGCCC
GAGTCAGATC TCGGCCGGCG AATCCGGCTG GATTTCGACG GCGTCTTTCG CGCCGCGCGT
GTGTTCGTGA ATGGGTTTTT TGTCGGCGAG GAGCCGAGCG GCTACCTCGG TGCGAGCTAC
GACGTTTCCG AATATCTGAA CTACGGCGGC GACAACGTCA TCGCCGTGCG GGTCGACGCG
TCGATGGAGG AGGGTTGGTT CTATGAAGGC GCCGGGATCT ACCGGCACGT TTGGTTGGTG
AAGACCGCGC CGCTTCACGT CGCGCTCGAT GGCACATGGG TCCGTACCGA CGTTTCGCCG
AAGTTCGCCA CCGTCACGAT CGAGACGCGC GTGAACAACG CCGGCCGCGC GCCCGCTGAC
TACACGCTCG AGCAGGAAAT CTTCGGCCCC GACGGCAAGT CGCTCGCCCG TTCCAGCGCC
GCGGCGCCGG CCGTCGCGCC CGGCGGCGTT GGCGTGCATC GCGATTCGCT TCGCGTCAAC
GCCCCACAGC TCTGGTCTCT CGAGTCGCCG ACGATGCACC GCGTCGTGAC CACGATCCGT
CAGGCCAACG CCATCGTCGA TCGCTACGAA ACCCCGTTTG GCATTCGCAC GATCCGGTTC
GATCCGAACC GGGGATTTTT CCTGAACGGG CAGCGCGTCG TGCTGAAGGG CACCAACAAT
CACCAGGACC ACGCCGGGGT CGGCGCGGCG ATTCCAGATA CGTTACAGGA ATTCAGGATT
CGCCGCTTGA AGGAAATGGG CAGCAACGCC TATCGCGCTT CGCACAATCC TTCGACCCCC
GAGTTGCTCG ATGCCTGTGA TCGCCTCGGC ATGCTCGTCA TCGAGGAAAA CCGGTTGATG
GGCATCAATC CTTACCACCT CGGCCAGCTC GAGCGAATGA TCCGGCGCGC GCGCAATCAC
CCGAGCATCA TCCTCTGGTC GCTCGGCAAC GAGGAATGGG GCATCGAAGG CAACATCAAG
GGCGCGCGGA TCACCGTGCC GATGCAGGAT TTCGCGCACC GGCTCGATCC GACGCGCCGC
ACCACCGTTG CGATCAGCGG CGGCTGGGGC GGCATCTCGA GCACCGTCGA AGTCGCGGGC
GTCAACTACG TCCGGCAGGC AAATGTGGAC AAACAACACG CGGAGTACCC CGAGCAGATC
ATCGTCGGCA CCGAAGAAAC GACGACGCAG CAGACGCGCG GAATCTATTT CACCGATCGC
GAGCGGGCGC ATCTCGCACC ACTCGAGGAC GGCTCGTCCG GCGGTAACTG CGAATTCGGC
TGGCGCTACT ACGTCGCCCG GCCGTGGGCC GCCGGGCTGT TCTACTGGAC GGGATTCGAC
TATCGCGGTG AACCCACGCC GTTCGGCTAT CCGGCGATCG CCTCGCAGTT CGGCATCCTC
GACACCTGCG GTTTTCCGAA AGACAGCTTT TACTACCTGA AATCGTGGTG GACGACTGAG
CCGGTGCTGC ACGTGTTCCC GCACTGGAAT TGGGCCGGTC GCGAGGGTCA ACCGCTCGAG
GTGCGCGTCC ACAGCAACTG CGGGGAGGTC GAGCTCTTCC TCAACGGTGC GTCACTCGGC
CGAAAAACCA TGGAGCCGAA CGGCCATCTG GCGTGGGCGG TCAACTACAC GCCCGGCACA
CTGCTCGCGC GCGGTTTCCG CGACGGCAAG GAAATCGCTA CTACGACGGT TGAAACCACC
GGCGCCCCGG TCGCGCTCGC GCTGTCGGCC GATCGCCGGG AACTGCGCGC CGACAGCCGC
GATGTCGCGG TGATCACGGT CGAAGCCCGC GATGCCGAGG CACGGCTCGT GCCGACGGGA
AATGTGCCCG TGACGTTCAC GCTGCGCGGA CCCGGCCGGA TCATTGGCGT CGGCAACGGC
GATCCGTCGT CGCACGAGCC CGACCAGTTT GTCGCGAGTG TGCGCGGGAT TAATCTCGGC
GAGTGGAACG CGCCCGACGG TTCGGTGAAG ACGGGCCAGA ATGTGTTCGA AGCGACGTTT
GATCGCCCCG CGCTCGGCGC AGGCGAGACG ATGACGCTCC TGTTGAATGC GCTCGGGACG
AACCAAACCG CCACGTTGAA CGGTGAGCCG CTGGTTCGCG ACGCCGCGCC CGCCCAGGCG
AAGATCGAGC TGCCGCTCGC CGCGGACACC CTGCGGCCGA CCGGCAACGT GCTCCGGATC
GAAGCGACCC GCTACGAAGA CTGGGGCACG CGCGACAGCC TGAAGCAGCT TTGGCCGGCC
ACGCTGCGCA TCGTCACGCC CGCGCCCGCC TGGCAGCGCT CGACGTTCAA CGGACTCGCT
CAAGTCATCG TTCAGACCAC CGGCGAGCCG GGCGCGATTG AGCTCGTCGC GACGAGCGAC
GGATTGAAGA GCGCCAGCGT CGAACTGACG AGCCGGTGA
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| Protein sequence | MKHPVLPRCL APLLSCAVLL TALLVLPHSL AAAAAVPAAG RERILLDAGW RFALGHATDP
ARDFGHGTGY FSYLAKTGFG DGAASPAFDD RTWRQLDLPH DWAVEVPFDP RGSHSHGYKA
VGPRFPERSV GWYRRSFHVP ESDLGRRIRL DFDGVFRAAR VFVNGFFVGE EPSGYLGASY
DVSEYLNYGG DNVIAVRVDA SMEEGWFYEG AGIYRHVWLV KTAPLHVALD GTWVRTDVSP
KFATVTIETR VNNAGRAPAD YTLEQEIFGP DGKSLARSSA AAPAVAPGGV GVHRDSLRVN
APQLWSLESP TMHRVVTTIR QANAIVDRYE TPFGIRTIRF DPNRGFFLNG QRVVLKGTNN
HQDHAGVGAA IPDTLQEFRI RRLKEMGSNA YRASHNPSTP ELLDACDRLG MLVIEENRLM
GINPYHLGQL ERMIRRARNH PSIILWSLGN EEWGIEGNIK GARITVPMQD FAHRLDPTRR
TTVAISGGWG GISSTVEVAG VNYVRQANVD KQHAEYPEQI IVGTEETTTQ QTRGIYFTDR
ERAHLAPLED GSSGGNCEFG WRYYVARPWA AGLFYWTGFD YRGEPTPFGY PAIASQFGIL
DTCGFPKDSF YYLKSWWTTE PVLHVFPHWN WAGREGQPLE VRVHSNCGEV ELFLNGASLG
RKTMEPNGHL AWAVNYTPGT LLARGFRDGK EIATTTVETT GAPVALALSA DRRELRADSR
DVAVITVEAR DAEARLVPTG NVPVTFTLRG PGRIIGVGNG DPSSHEPDQF VASVRGINLG
EWNAPDGSVK TGQNVFEATF DRPALGAGET MTLLLNALGT NQTATLNGEP LVRDAAPAQA
KIELPLAADT LRPTGNVLRI EATRYEDWGT RDSLKQLWPA TLRIVTPAPA WQRSTFNGLA
QVIVQTTGEP GAIELVATSD GLKSASVELT SR
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