| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0982 |
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| Symbol | |
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| ID | 6205379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 1208081 |
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| End bp | 1208932 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641690605 |
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| Product | rhomboid family protein |
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| Protein accession | YP_001817870 |
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| Protein GI | 182412804 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00942219 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCGCTTG CGTCCGAACC GTTCGCCGAG TCCGCCGAGG ATCGCACCCC GACGGATCTG
GTCGAGGTCG GCGTTTATCG TTCGTCGGGC GAAGGGTTTC AGCACGGGCT GGTCGCGTTG
GCGCTCGGGC GGCCGTTCTG GCTCGTGCCG GCGGAGCAGG GCTACCGGTT GATGGTTGAG
TCCGAACCGG CGGCGCTCGT GCGGGAGCAA CTCGCATGCT TCGACCGCGA AAGTGCGAGC
TGGCCGCCGC GGGCGGAACC AGTCCCGCGG ACGATGCAAC GGACGGATTG GCGGACGCCG
CTGCTCTGGG CGGCGGTGAC GGCGGGGGCG TTTCGGACGC AACTCATTGA TCCCGGCTGG
ACCGAGCGCG GGGCGCTCGA TGCGGCCGGC GTGTGGGAAC GCGGCGAATG GTGGCGGCCG
GTTACCTCGC TGTTCCTGCA CGGCGACATC GCGCATCTCG TTTCGAACGC GCTCAGCGGG
ATCTTCGTTT TTTCCGCGGT GCTCACGGTG TTTGGGCGGA TACGCGGCTG GCTGCTGCTC
GCCGCGTCGG CGGTGCTGGG CAACGTCATC GCGGTGACGG CGCATCGCGC CGACGACTAT
CGCTCGATCG GCGCGTCGAC GGCGGTGTTC GCGGCGCTGG GTTTGCTCAC GGGCGGGGCC
GTGCGGCGCG TGATGCGCGG GCGCACGACG GAGCGCTGGC GTGCGGTGTT CGCGCCGTTG
GCCTCGGGAT TGGTCGTGCT CGCCCTGTTC GGTGCCGGCG AGGTGCACAT CGACGTGGTC
GCGCACACCA CGGGCTTCGT GGCGGGTGTC GCGCTCGGTT TGGCCGCCGG GCCGGTGTTG
CCCCGAGCGT GA
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| Protein sequence | MPLASEPFAE SAEDRTPTDL VEVGVYRSSG EGFQHGLVAL ALGRPFWLVP AEQGYRLMVE
SEPAALVREQ LACFDRESAS WPPRAEPVPR TMQRTDWRTP LLWAAVTAGA FRTQLIDPGW
TERGALDAAG VWERGEWWRP VTSLFLHGDI AHLVSNALSG IFVFSAVLTV FGRIRGWLLL
AASAVLGNVI AVTAHRADDY RSIGASTAVF AALGLLTGGA VRRVMRGRTT ERWRAVFAPL
ASGLVVLALF GAGEVHIDVV AHTTGFVAGV ALGLAAGPVL PRA
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