Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_0935 |
Symbol | |
ID | 6206529 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 1151030 |
End bp | 1152142 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641690558 |
Product | NifR3 family TIM-barrel protein |
Protein accession | YP_001817823 |
Protein GI | 182412757 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0042] tRNA-dihydrouridine synthase |
TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.489775 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCTCG GGCCCTACGA ACTCTCATCG AACCTGTTTC TCTCGCCGCT GGCGGGTTAC ACCAACCTGC CGTTCCGGTT GACCTTGCGC GAACTCGGCG GGCTGGGGTG GGTGACCACG GACCTCGTCA ACGCGCGTTC GCTGCTCGAG CGCAATCCGG CCGCGCTCAA GCTCGTGGCC AGCAGCGCGG AGGATCGGCC GATGTCGATC CAGCTATTCG GGAGCGTGCC GACGGAAATG CGCGACGCCG CGCGGATCTG CGAGGACCTC GGCGCCCAAG CCGTCGACAT CAACATGGGC TGCCCGGTGC GCAAGGTGGT GCGCGTCGGC GGCGGTTCGG CGATGATGAC AGAACTGAAC CAGACCGCCG CGCTCGTCCG CGGGATGATT GAGGCGGTGA AGATTCCGGT CACGGCCAAG ATGCGGCTCG GCTGGGACGA CGAGAATCTC ACCGCGCCGG ACCTCGCGCG CGTACTCGAG GACGCGGGCG TTGCGGCCGT ATTCGTACAT GGTCGGACCC GCGCGCAGGG TTTCAGCGGC ACGGTGAACC TCGCCGGCAT CGCCGCCGTG GTGCAGGCGG TTAAACGCAT TCCCGTGATC GGCAATGGCG ACGTCACCAC CCCTGAGGCG GCGCGCGCGA TGATCGAGCA AACCGGCTGT GCCGGCGTGA GCATCGGGCG GGGCGCATTT TACGACCCGT GGATTTTCCG ACGCACCCAC CACCTTCTCA CCTCCGGCGA ACTGTGGCCC GAACCGGGCT TCGATGAGCG GGTGCGCGTG ATGCGCCGCC ACTTCGAGCG CTATTGCGAA TTCTACGGTG AGGAAAAAGG CCCGCGGCTG TTCCGCAAGG TGGCGCCTTG GTACGCCAAG CGGTTCGGTC CGGCCAAGCC GTTCAAGCGG CGCATCATCA CGATCGACAG TCGCGCTGAC TTCGACGCCG CGCTGGCGGA GTATATCGCC TGGCGCGCCA CGTACTGCGA CGAGCATGGC CAGCTGCTGC CGAAGTTCGT CCCGCCGCCG ATGGTCGCGT CGTTCTTGAG GCCGCCCGGC GAGGCCGACG CGCGGGAACG CGAATCGATT CCCGTGCCGA AAGGACCGGT CGACGTCTGG TGA
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Protein sequence | MRLGPYELSS NLFLSPLAGY TNLPFRLTLR ELGGLGWVTT DLVNARSLLE RNPAALKLVA SSAEDRPMSI QLFGSVPTEM RDAARICEDL GAQAVDINMG CPVRKVVRVG GGSAMMTELN QTAALVRGMI EAVKIPVTAK MRLGWDDENL TAPDLARVLE DAGVAAVFVH GRTRAQGFSG TVNLAGIAAV VQAVKRIPVI GNGDVTTPEA ARAMIEQTGC AGVSIGRGAF YDPWIFRRTH HLLTSGELWP EPGFDERVRV MRRHFERYCE FYGEEKGPRL FRKVAPWYAK RFGPAKPFKR RIITIDSRAD FDAALAEYIA WRATYCDEHG QLLPKFVPPP MVASFLRPPG EADARERESI PVPKGPVDVW
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