Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_0845 |
Symbol | |
ID | 6204816 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 1033041 |
End bp | 1035314 |
Gene Length | 2274 bp |
Protein Length | 757 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641690468 |
Product | cytochrome b subunit of formate dehydrogenase-like protein |
Protein accession | YP_001817733 |
Protein GI | 182412667 |
COG category | [C] Energy production and conversion |
COG ID | [COG2864] Cytochrome b subunit of formate dehydrogenase |
TIGRFAM ID | [TIGR01583] formate dehydrogenase, gamma subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.763615 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTTCGAT CATCCCCTGA TCGGGCGCCA GCTGCCGTCT ACCCCCGCGG CGCAGCGGCT CTGCCCAAGA CTGCTGCATT TCGTCTCGCC TTCGGCCTCA CGCTCGCTCT CGCGGGCGGT ACCGGCCGGC TTGCGGCCGC GGACGAACCC GCCCCGCAGT CGAGCGCCAG CTGCCTCGAG TGCCACTCCG ACGAAACGCT CACCGAACGC CGGCCCGACG GCACCAAGGT TTCCCTCTTT GTTTCCGCGG ACAAAGTCGG CGCCTCGGTC CACGGTTCGC TCGAATGCGT CGACTGCCAC GAGGGCATCG ACGGCGAGGC CTCACCGCAT CGCAAGCAGC GCGTCGCGGT GGATTGCTTC TCCTGCCACG ACGATACCGC GCCGAAGCAC AAGTTTCACT CGCGGCTGCA GCTGGACCCG CGCCCCGAGG GCAAGGACAC GTCGTGCACG GAATGCCACG GCACGCACGA GGTGCAGCGC GTGAAGTCGC GCGACTTCGC GATGTCGAAG CCCCGGCTGA CCGAAGGCTG CGGTCAGTGC CACGCGCAGG CCCGCGACCA CTTCGTCGCC TCGGCGCACG CCCGGCCCGC CGGCAACGCC AACCCGCCGC TCAACTGTCT CACTTGCCAC AAGGATCCGC TGATCGCCGC GAAGGAACCG GCATCCATCG CGGAACAAAA ACTCGCCCAA GCCAAGCTCT GCGAATCGTG CCACGTCGAG AAACCCGATG TCGCCAGCCA GGTGCTCCGG CAGACGAAGT TCGTGGCGTC CTTCGACCAG AGCGTGCACG GTGCCGCGCT CCACGCTGGC AAACAGGAAG CCGCCACCTG CGTCGACTGC CACGGCGCGC ACGAGATGAA TCGCGCGATC ACTACCGGCG CGCGGATGAA CAAACAGCAC CAGTCGGCCA CCTGCGCCAA GTGCCACGAG GAGCAGGCGC GCGATTTCGA TTCGAGCGTG CACGCCGCCG CCTTGCGCAA GGGCAACGCC GACTCCGCCG TCTGCACCGA CTGCCATGGC GAACACGACA TCCGCGGCCA CAAGGATCCG ACCTCGCCGG TGCACGCGAG CAATGTCGCC CAGCAGGTCT GCGCCAGCTG CCATGACTCA CTCCGGCTCA CGCAGAAATA CGGGCTCTCG TCCCAAACCT TCCAGACGTT CTCCGACAGT TACCACGGCT TGGCTGCGCG TGGTGGCGCC GTCGAGGTGG TGAACTGTGC CAGCTGTCAC AGCGCGCACG CGATCAAGTC CTCGCTCGAT CCGACCTCGA CGATTCACAA GTCCAATCTC GCGCGCACCT GCGGCGAGTG TCACCCCGGC GCAAACAAGC GCTTCGCCGT CGGCGCCGTG CACGTCAGTC CCCAGACCGC CGATGCGAAC GACGCTAACG CCCGCGTGCT CTACTGGGTC GCAACCATCT ACGTGTGGAT GATCGTGCTG ATCGTCGGCG GCATGGCGCT GCACAACCTG CTCGACTTCT TCAAAAAGAT CCGGCGCAAG CTCGCGATCC AGAAAGGGCT CATCGAGCCC GAGCACGTCG CGCACCGGCT CTATCTGCGC ATGACGGCCC ACGAACGGTT TCAGCACGGC GCGCTCGTCA TCAGCTTCGT CCTGCTGGTG GTCACCGGCT TCATGCTGCG CTATCCCGAA GCGTGGTGGG TCGTGGGCAT CCGCAACCTC AGCGCGCGCG CCTTCGAGTG GCGCAGCCTG ATTCATCGGA TCGCCGGCGT GGTGATGCTG GTCGCCGGCG TGTGGCACGT GGGTTATCTC GCGTTGTCGC CCGCGGGCCG TTCGCTCCTC CGCGATCTGC TGCCGCGCTG GCGCGACGTC ACCGATCCCT GGAAGGTGCT GCGCTACAAT CTCGGACTAA GCCCGACGAA GCCGGAGTTC CCACGGTTCA GCTACATCGA GAAAGCCGAG TATTGGGCGC TCGTCTGGGG CACCCTGCTG ATGGGCGTGA CCGGCATGAT CCTGTGGTTC GATAACACTT CGATGGGCCT GATCACCAAG CTCGGCTTCG ACGTCTCGCG CGCGATTCAC TTCTACGAGG CGATCCTCGC GACGCTGGCG ATCATTGTCT GGCATTTCTA CTTCGTGATC TTCAACCCGG ACGTTTATCC GATGAACCTC GCCTGGCTCA CCGGCCGGAT GTCCGAGGAG GAGCTGCTCG AGGAGCATCC GCTCCAACTC GCCGACCTCA AGGCGGCCGA AGCCGCGCAG AAGAATTCTC CCGCAACGCC GCCGGAAAAT CCGCCGCCAC CCGCGGCGTC CTGA
|
Protein sequence | MVRSSPDRAP AAVYPRGAAA LPKTAAFRLA FGLTLALAGG TGRLAAADEP APQSSASCLE CHSDETLTER RPDGTKVSLF VSADKVGASV HGSLECVDCH EGIDGEASPH RKQRVAVDCF SCHDDTAPKH KFHSRLQLDP RPEGKDTSCT ECHGTHEVQR VKSRDFAMSK PRLTEGCGQC HAQARDHFVA SAHARPAGNA NPPLNCLTCH KDPLIAAKEP ASIAEQKLAQ AKLCESCHVE KPDVASQVLR QTKFVASFDQ SVHGAALHAG KQEAATCVDC HGAHEMNRAI TTGARMNKQH QSATCAKCHE EQARDFDSSV HAAALRKGNA DSAVCTDCHG EHDIRGHKDP TSPVHASNVA QQVCASCHDS LRLTQKYGLS SQTFQTFSDS YHGLAARGGA VEVVNCASCH SAHAIKSSLD PTSTIHKSNL ARTCGECHPG ANKRFAVGAV HVSPQTADAN DANARVLYWV ATIYVWMIVL IVGGMALHNL LDFFKKIRRK LAIQKGLIEP EHVAHRLYLR MTAHERFQHG ALVISFVLLV VTGFMLRYPE AWWVVGIRNL SARAFEWRSL IHRIAGVVML VAGVWHVGYL ALSPAGRSLL RDLLPRWRDV TDPWKVLRYN LGLSPTKPEF PRFSYIEKAE YWALVWGTLL MGVTGMILWF DNTSMGLITK LGFDVSRAIH FYEAILATLA IIVWHFYFVI FNPDVYPMNL AWLTGRMSEE ELLEEHPLQL ADLKAAEAAQ KNSPATPPEN PPPPAAS
|
| |