| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0728 |
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| Symbol | |
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| ID | 6206983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 899316 |
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| End bp | 900029 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641690352 |
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| Product | RNA-binding S4 domain-containing protein |
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| Protein accession | YP_001817617 |
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| Protein GI | 182412551 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.101731 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCCGGC TCGACCAGCT CCTCGCCAAC CTCGGCTATT GCAGTCGTCG TGAAGCGCGC
AGCTGGATCG AAGCAGGCCG GGTGACTATT GGTGGCGAAG CGGCCAACGA TTCCGGACAG
AAAGCCGCGG CGGCCGACGT GCGGATCGAC GGCGAGCCAC TCGACCATCC GGACGGCCTG
CTCCTGCTGT TGCACAAACC CCTTGGGCTC GTCTGCTCGC ATGACGAGCG CGAAGGCCCA
AACATCTACT CGCTGCTGCC GGAGCGCTGG CGCCGGCGCA ACCCGGCGGT CACGAGCGTC
GGTCGGCTCG ACAAGGAAAC CAGCGGGCTG CTGCTGTTGA CCGATCAGTC GTTGCTCGTG
CACCGGCTCA CCTCGCCGAA ACACAAGGTG CCGAAAGTCT ATCGCGCGTC CGTCGACCGC
GATCTTTCTC CGGATCTGGT TCCGCTGTTC GCGAGCGGCA CGCTGCAGCT CGAGGGCGAG
GCGCATCCCT GCGCGCCCGC CGAGTTGCGG CTGCTCGGAC CGCGCGAGGC GGAACTCACG
CTCACCGAGG GCCGCTACCA TCAGGTTCGT CGGATGCTCG CCGCCTGCGG CCTCACTGTG
CTCACGCTGC ATCGCGCGCG GTTCGGGCAC CTCGCCCTCG ACGATCTCGC GCCCGGCGCC
TGGCGTGAAC TGCCGCTCGA CGAATTTGCC GCGCGGTTTG GTCTCGCACG ATAG
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| Protein sequence | MRRLDQLLAN LGYCSRREAR SWIEAGRVTI GGEAANDSGQ KAAAADVRID GEPLDHPDGL
LLLLHKPLGL VCSHDEREGP NIYSLLPERW RRRNPAVTSV GRLDKETSGL LLLTDQSLLV
HRLTSPKHKV PKVYRASVDR DLSPDLVPLF ASGTLQLEGE AHPCAPAELR LLGPREAELT
LTEGRYHQVR RMLAACGLTV LTLHRARFGH LALDDLAPGA WRELPLDEFA ARFGLAR
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