| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0701 |
|---|
| Symbol | |
|---|
| ID | 6208755 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 859352 |
|---|
| End bp | 861310 |
|---|
| Gene Length | 1959 bp |
|---|
| Protein Length | 652 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641690325 |
|---|
| Product | glycoside hydrolase family protein |
|---|
| Protein accession | YP_001817590 |
|---|
| Protein GI | 182412524 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.308289 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.494324 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGCG CGTTTCAATG GGACCTCGCC CGGCAGGTCG AGCGACTCGA CTGGCTGCTC
GCACAGCTGC CGCGTTACGC GGATTGGGGT TACCAGGAAC TCTATCTGCA CCTGGAGGAC
GCGATCGAGT ATCCGAGCCT ACGCCGCGTC GCGCGGCGCG ACGCCTACAG CCGGCGGCAG
GTCGGGCAGT TGGTCGACGC GGCGTCTCGT GCGGGGATCC AGGTCGTGCC GATCGTCAAT
CTGCTCGGCC ACACGCAATA TCTCATCAAG GTACCCGAGC TGCGCGACCT GAACGAACTC
CGCGCCGCGG ACGGGTCGCC ACTCGAGCGT GGGCAGATTT GCCCGCTGCA TCCACGCACG
CTGGAGATTG CTGAATTACT GCTGAGGGAC GTCGCGCCGT TCTGCACCGC GGGCAAGGTG
CACGTCGGGC TCGACGAGTC ATTTCATCTC GGCCGGCACC CGCTGAGCCG AAAAGAAATC
GCGCGGATCG GGCGCGCCGC CCACTTCGCC CGCTACGTGA ACCGGCTCCA CGGGCTCACG
CAGGCGCTCG GACTGGAGAT GGGGATGTGG GCCGACATGC TCTACTTCCT GCCGGAGGCG
ATTCCGCTGC TGCCGACCGG CATCACGGCT TACGAATGGT ACTATCACGC GTTCCGCCGC
TGGCCGCGCG TCGAATTGTT CAACTTTGCG GAAGTCGATA TTGCCACCCC ACTCCGCCGC
CGCGGGATCC AGCTTTACGG CTGTCCGATG AATGGTGCCT TTCGCCACGA GCCGTTGCCG
CACTTCGGTG ATCGGCTCGG CAACATCGTC GCCTGGTGGC AGCACGCGCA GCGGATCGGC
GCAGCGGGTT TCCTGATGAC CGGCTGGGAA CCGAACCGGC TCGCGCTTGA GCTCACCACC
GCGATCGATG CCGCTGCGGC TTGCCTATGG CTCGACCCCG GCGTGACGGA ACCTCGCGAG
ATGCTAGCGC GCGGTTTCGC GCGAGCGTTT TCCAGGGTAG GGCGCGTTAT CCCTAACGCG
CCGCTCAGTT CTCCGGGCGC ACGGCGAACC CGGCGGATTA AGGATAATCC GCCCTACCAC
CAATGGGCCG ATGTCGCCTT CGCGTGCGAT CGGTTTCCGT TTGCCGGCTA TCCGCGTTGG
CAGATCAACG AGCGCTGGGA CACGCTCTCG CGGCGCGAAC CACTCGCTGG CTACCGCGCG
GAAGAACGAC ATTTCGCGCG AATGGTTCAA CAGGCCCGAC GCGCGGAAGC GCCTGGGCCA
ATGCAGGCGA GCGTGGAGTT CCGACATTAT CTCGCAGTGC GTGATTATGC TCTGCGCAAG
CTAGCCGCCC TGGGAGCGCG GGCGTCCCGC CCGCTCCGGA ACGCTGACGC GGGCGGGGCG
CCCGCGCTCC CCCTTCGTGC TCTTCAGTCC TCGATTCCCC CTGCGCTGCA TGCTGCCCGC
GTCATGTGGG GACGAACCCG CGATCCACGC GTCGCGAGCC CGAATGAGCA GATCGTGCAC
GCCGATGCCG CGCGACTACG CGCGTTGCGT CAAGGCAAGC GCCTGTTTGG AGGTGAATGG
CAGATCTGCT ACCGGGTGTG GAATTTTGCG CCGGCGGTTC AGCTGGTCGG GATCGAGCAG
CAGCAGCCGG ACGGCTCCTG GCAAACACTC CAGTCGTGCT ACACGATCGA GTTTCAGAGC
GCGGCCGCCC GGCCGCGCGG TCCGTTCGTG CGCGAACACG CCGCGCCGGT CGACTGGGAC
GGCGCTCGCG AGCGGCTGCC GATCCTGCGG CTGTTCGTCC GCGGGGTCGG CGAGGTCAAA
GTCGGCGCCA TCGCGCTGAC CAACGGATCG GCGGTCCTGC CGGCTCGCGG ACTACGCGGG
CAGTGGCGCA GGCTCGGCAA TCCTGCGGCG CGACGCGGTT GGCCTGTCTT TGATTGGACG
CGCAACACCG CGGCGTTGCC GCTGCGGTTT TCGCCGTAA
|
|---|
| Protein sequence | MIRAFQWDLA RQVERLDWLL AQLPRYADWG YQELYLHLED AIEYPSLRRV ARRDAYSRRQ
VGQLVDAASR AGIQVVPIVN LLGHTQYLIK VPELRDLNEL RAADGSPLER GQICPLHPRT
LEIAELLLRD VAPFCTAGKV HVGLDESFHL GRHPLSRKEI ARIGRAAHFA RYVNRLHGLT
QALGLEMGMW ADMLYFLPEA IPLLPTGITA YEWYYHAFRR WPRVELFNFA EVDIATPLRR
RGIQLYGCPM NGAFRHEPLP HFGDRLGNIV AWWQHAQRIG AAGFLMTGWE PNRLALELTT
AIDAAAACLW LDPGVTEPRE MLARGFARAF SRVGRVIPNA PLSSPGARRT RRIKDNPPYH
QWADVAFACD RFPFAGYPRW QINERWDTLS RREPLAGYRA EERHFARMVQ QARRAEAPGP
MQASVEFRHY LAVRDYALRK LAALGARASR PLRNADAGGA PALPLRALQS SIPPALHAAR
VMWGRTRDPR VASPNEQIVH ADAARLRALR QGKRLFGGEW QICYRVWNFA PAVQLVGIEQ
QQPDGSWQTL QSCYTIEFQS AAARPRGPFV REHAAPVDWD GARERLPILR LFVRGVGEVK
VGAIALTNGS AVLPARGLRG QWRRLGNPAA RRGWPVFDWT RNTAALPLRF SP
|
|---|
| |