Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_0594 |
Symbol | |
ID | 6208572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 710753 |
End bp | 712558 |
Gene Length | 1806 bp |
Protein Length | 601 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641690216 |
Product | tetratricopeptide TPR_4 |
Protein accession | YP_001817484 |
Protein GI | 182412418 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3063] Tfp pilus assembly protein PilF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCCG CGTTGGAACA AACCGCCGCG CCCGCGCCGC GTGGCGGCTG GCTGCGTTGG TGGCCGGTGA TGGCGGCCGC GGTCCTGATC GGTCTCGGCG CCTGGGGCAC CGCGCATTGG CTCGAGTACC GTGCGCTCGC CCGGATCCAG CAATCGCTCC CGCCGCTGCC TGCGCTCGGC CAACGGCCCG CCGTGCTGGG CGAACGTCTC GCCCAGGCGC GGGCGGCCGC GCTCGCCGGC GATCGCGTCA TTGAGCATGC GGCCGAACTC GGCCGGCTGT TTCACGCCAA CGGATTCCAC CGCGAGGCGC AGGTCTGTTG GGAAGCGCTT CGCTCGGCTC AGCCGCGGGT CGCGCGCTGG AGCTACTACC TCGCCGACCT GCGCCGCACC GCCGGCGATC AGGCAGGTTA TGTCGCGCTG CTCGAGGAAA CCGTCGCCCG CGCGCCGGAC TACAGCCCCG CCTGGCTGCA GCTCGCGGGC GTGCGGTTCA AGTCTGGCGA GATCGATGCA GCCGCCAGCG CCTATCAGCG CCGGCTCGCG TTGCTCCCGG GCGACTCCTA TGCGCGGCTG GGACTCGCCC GCGTGGCGCT GCATCACCAG CGCACCGCGG AAGCGCGCGA CCTGATCGAG CAGATCGTGC GCGAAGATCC AAAGTTTCCC ACGAGTCACA ATCTTTATGC CGAGATGCTG GCGGCCGACG GCAACCGCGA CGGTGCGCGA CAGCAGCGCT GGCTCGCGCG GCAGGCCGGA CGTTTTCGAG AGGCCGACGA TCCCTGGCTG ACGGAGCTCA ACGCGTGGTG CTTCGATCCC GACCGGCTGT TCATGCTCGG CACGATCGAT TTTCAAACGG AGCGTCATCA GGAAGCGCGC GCGTTCTATG AGAAGGCCGT GCAGCTCGCG CCGGAGGATG CCGAAGCGCA CGCGCTGCTG GGTGATCTCT ATCTAAAACA GGGCGATCCG GCGCGGGCGC GAGACGCGCT CGAACACAGC CTGCGGATGC CGCGCCCCGG AAAACCGCCG GCGATGCTGT TCGTAAATCT CAGCCAGGCT TACCGCGAGT TGCACGACTC GGCCCAGGCG CTGGCGATCG TGGAGCGCGG CTTGCGCGAA GCGAGTGTGT CGTTCGATCT GCACAATGCG CACGGCATCG CGCTCGCCGA TCTCGGACGG CACGAGGAGG CGATCGCCGC TTATCGACGC GGACTCGCAA CGCAACGCGG CAACGCAGAG ATCAATTTCA ATCTCGCGAT CTCGCTGCTG GTGCTCGGCC GTGGCGACGA GGCGCACGCT CACCTCAAGC AGTCATTGAC ACTGCAGCCC ACGTTTCCCA AGGCGCTCGC GCTGCTCGGC CGGATGGAAA TGAGCGCCGG GCTTTGGCGC GAGGCGGAGC AGTATCTCCG GCCGCTCTAT GAAGCTTTTC CGGAAGCGCC CGACTCGCAC CAGCTCCTCG CGGAATGGGA GCTGCGTGCC GGCTCCGCCG CGAGCGAGCA AAATGACGCG GCCGCGGCCG AAGGGCATTT TCGCGCGGGG CTCGCGCTCG CGCCCGAGCA GCCGGATCTG AATCTGCAGC TCGGCGTGCT GCTGGTGACG CTGGGGCGCG CAGCGGACGC GGTGCCTCCT TTCGAGACCT ATCGCCGCGT GCGGCCCGAG GATCCGAGTG GTGCGTTGTT CCTCGGCCAG ACGTATGCGC AGCTGGGCCG AATTCCGGAC GCACGTCGCG TGCTGGCAGA AGGCGAACAA CTCGCCACGC GCGCGGGCAA CGCCACGACG GCGCAACACT GCCGCGAAAT TCTGAGCCAG CTGTAG
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Protein sequence | MSAALEQTAA PAPRGGWLRW WPVMAAAVLI GLGAWGTAHW LEYRALARIQ QSLPPLPALG QRPAVLGERL AQARAAALAG DRVIEHAAEL GRLFHANGFH REAQVCWEAL RSAQPRVARW SYYLADLRRT AGDQAGYVAL LEETVARAPD YSPAWLQLAG VRFKSGEIDA AASAYQRRLA LLPGDSYARL GLARVALHHQ RTAEARDLIE QIVREDPKFP TSHNLYAEML AADGNRDGAR QQRWLARQAG RFREADDPWL TELNAWCFDP DRLFMLGTID FQTERHQEAR AFYEKAVQLA PEDAEAHALL GDLYLKQGDP ARARDALEHS LRMPRPGKPP AMLFVNLSQA YRELHDSAQA LAIVERGLRE ASVSFDLHNA HGIALADLGR HEEAIAAYRR GLATQRGNAE INFNLAISLL VLGRGDEAHA HLKQSLTLQP TFPKALALLG RMEMSAGLWR EAEQYLRPLY EAFPEAPDSH QLLAEWELRA GSAASEQNDA AAAEGHFRAG LALAPEQPDL NLQLGVLLVT LGRAADAVPP FETYRRVRPE DPSGALFLGQ TYAQLGRIPD ARRVLAEGEQ LATRAGNATT AQHCREILSQ L
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