| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0572 |
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| Symbol | |
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| ID | 6208902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 689317 |
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| End bp | 690000 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641690194 |
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| Product | ABC transporter related |
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| Protein accession | YP_001817462 |
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| Protein GI | 182412396 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.648168 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATGAGT CGAACCCTGT GCTCGCCGAG GCCACCGGCG TGTGGAAGAG CTACGATCGC
GGCCGGATCC CCGTACTGCG GGAGATCAAT CTCGTGGTCC GCGCGGGCGA TCTCGTCGCG
TTGTGGGGCG CCTCCGGCTC GGGGAAAAGC ACGCTGCTTC ATCTGCTCGG TGGACTGGAC
GCCCCGGACC GCGGCGAGCT GCGTGTGTGC GGTCTCGATC CGCGTCACGA GGCAAACCGC
GTTACGCTTC GCCGTCACCA CCTCGGTTTC GTGTTTCAGC TCCACAATCT GATCCCGGAT
CTGACCGTGG AGGAGAATCT GCGGGTCCCC GCGCTGGCGA CCGGCGCTCC GCGCCACGCG
ACCACGGCGC GGATTCGCGA GCTCACCGAA CTCGTCGGTA TCGCACACCG GCTTACCCAT
CGGATCCAAG ACCTTTCCGG CGGCGAACGG CAGCGCACGG CGATCTGCCG TGCCTTGATC
AACCGGCCCG CACTGCTACT GGCCGACGAA CCGACCGGCT CGCTCGACGA GAGCACCGGC
GCCACCGTGT TCGCGCTACT CAAGCAGCTC GCAGAGCGTG ACCGCATCGC CGTTGTCCTC
GCCACGCACG AGCGCCGGTT CGCCGAAGCG TGCCAGCGGA TTCTGCGCGT GCGCGATGGA
CGGTTGGACG AGATCGCCGC ATGA
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| Protein sequence | MNESNPVLAE ATGVWKSYDR GRIPVLREIN LVVRAGDLVA LWGASGSGKS TLLHLLGGLD
APDRGELRVC GLDPRHEANR VTLRRHHLGF VFQLHNLIPD LTVEENLRVP ALATGAPRHA
TTARIRELTE LVGIAHRLTH RIQDLSGGER QRTAICRALI NRPALLLADE PTGSLDESTG
ATVFALLKQL AERDRIAVVL ATHERRFAEA CQRILRVRDG RLDEIAA
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