Gene Oter_0560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_0560 
Symbol 
ID6206274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp678964 
End bp679767 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content65% 
IMG OID641690182 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001817450 
Protein GI182412384 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGCAT TTCTGCTGTT GGCCTGCCTG CTGAGCCTCG AGCTCGCCGC AGCGCCGGAT 
AAGCTCGTCG GGGCGGCTGC GGCCGCGCCG GCTGTAGTCG TCCTGCACGA CATCACCGGC
CCGATGAAAA CCAACGCCTA CCTGCTCTAC GATCGCGCGA CGAGAGACGC TGCGCTCATC
GACGTCGGCG GTCCGATCGA CGCGCTGCTC GCGGTGATCG AGCAGCGCGG CTTGCAGGTC
CGATATTTGC TCACTACTCA CGCGCACGTG GATCATGTGC AGGGGTTGCC TGCGGTGCGC
GCCCGCTTCC CCCGCGCACA GTGGTGCGTG TCGCGTCTCG AATTCGAGGC CACCGCATTC
TACGCGCAAT GGGAACAGGT GATGGCGCCC GAAGAAGCCG CCCGCATCAA GGCGGGCATG
GCTGCGGATG CGGCGCTGGC CGAGACGATG TCGTTCGATT TCGCACGACT CGGCCAACCG
GACGTCTTCG TCGAAGACGG GCAGACCTTC CCGCTTGGCG GGCTCACGCT GCGGGTGATC
GCCAGCCCGG GGCACTCCGG TGGCAGCGTC TGTTACTCCA CCGCGGGCAT CCTGTTTTCG
GGCGACGTGC TGTTCCACCG ACGGATCGGT CGCTGGGACC TGCCCAAGGC CGGCGGACGC
GCCGTATTGG AAACATCGGT GCGCCGACTC TACCAGCAGT TGCCGGACGA AACCATCGTC
CATCCAGGAC ACGGACCATC GACCGAAATC GGAATCGAGA AAACGCAAAA CCAGCAGGTG
AAGCTCGCGC GGGCGAAAAC CTGA
 
Protein sequence
MRAFLLLACL LSLELAAAPD KLVGAAAAAP AVVVLHDITG PMKTNAYLLY DRATRDAALI 
DVGGPIDALL AVIEQRGLQV RYLLTTHAHV DHVQGLPAVR ARFPRAQWCV SRLEFEATAF
YAQWEQVMAP EEAARIKAGM AADAALAETM SFDFARLGQP DVFVEDGQTF PLGGLTLRVI
ASPGHSGGSV CYSTAGILFS GDVLFHRRIG RWDLPKAGGR AVLETSVRRL YQQLPDETIV
HPGHGPSTEI GIEKTQNQQV KLARAKT