Gene Oter_0556 details

Gene Information

• Locus tag: Oter_0556
• ID: 6208369
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Opitutus terrae PB90-1
• Kingdom: Bacteria
• Replicon accession: NC_010571
• Strand: +
• Start bp: 671391
• End bp: 674783
• Gene Length: 3393 bp
• Protein Length: 1130 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 641690178
• Product: immunoglobulin I-set domain-containing protein
• Protein accession: YP_001817446
• Protein GI: 182412380

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.329662
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 11
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCTTCCGC CGTATCCGAT CCCGCGGCGC GACCACCTCT GTGCCGGTAA ACAGCACCTC 
CTCACGACCA TGCGCCTCTG GATTCCCCTA GCCTTCTGTT CCGCGCTGCT CTGCCTCGCC 
ATGCATGCGC AGAGTTACAC GTTCACAACC CTTGCCGGAG AATGGAACAA GGGAAGCCGT 
GATGGGGCGG CGGCGGTGGC GAGGTTCAAC GGAGCCAACG GAGTGGCGAT CGCCCCCAAC 
GGCCTTGTCT ACGTAGCGGA TCTCGCCAAC TCGACCATCC GTGCGATCAC TCCCGCAGGG 
GTGGTCACGA CGCTCGCCGG CGTGGCGAAT GTGCATGGCT GCATCGACGG AGTTGGCAGC 
AACGCATTGT TTCACAATCC GAGCGCTCTC GTCGTCGGGC CGAGTGGTGA CCTCTACGTT 
GCCGACAGCA ACGGCCATGC GATCAGAAAG GTGACTCCGG CCGGGGTCGT CACCACGCTC 
GCCGGAGGCC CGCTCCGCTA TGGGTACATG GATGGGCCCG GCACCGAGGC GCAGTTCTCC 
TACCCCCGCG GCATCGCCGT GAATGCCACG GGCGTTATCT TTGTCTCGGA CCGCTCAGCG 
CACACCATCA GGCGAGTGGA CCAACTCGGA AACGTGTCGA CCTGGGCGGG CCACGGCGGC 
AGCGCGGGCA GCGCCGATGG TCCCGGGGAT CAGGCGCGGT TCAGGGATCC CGAGGGACTG 
GCGATCGATG CTGCGGGCAA TGTCTACGTG GCCGACATCA ACAACCACAC GATCCGAAAG 
ATCAATCCGG CCGGTGAAGT CACTACCCTG GCAGGCGCGG CAGGAGAAAG CGGCTTCGCC 
GATGGCCCGG CAGCAAATGC GCGCTTCTTC TGCCCCACCT CCCTCGCTAT CGACCCGGCG 
GGTGCCATCT GGGTGAACGA TGCCATCAAC CGGGCGATCC GGAAGATCAG CCCGGAGGGA 
ACGGTGACGA CCGTCGCCGA CACCGCAGGC GAGGGCATCA CGATCGATCC GAACGGAGTT 
CTCTACATCG CGGCGGATGA TCGCATCAAA CGGCTGGAGT CGGGCTCCGT CCTGTCCGTC 
GTCGCCGGGC CGACCGACTC GTACACCAGC AGAAACGGCG TTGGCGCCAA CGCGCGTTTT 
GTGCAACCGA TCGGATCCGC GCTCGCCGTT GACGGAAATC TGTATGTGAC GGACTCCGGC 
GGATACGCAA TCCGCCGGGT CACGCGCTCG GGCGAGGTTT CGACCCTTGC CGGGTTGCTG 
GGTTACCCCG GATTCCGCGA CGGATCGGGC TACGCAGCAC AGTTTCGGGA TCTACGAGGG 
ATCACGCCGG ACAAGGAGGG CAACTTGCTG GTGGGCGACG GTCGCACGAT CCGAAAGGTC 
ACCCTGGCCG GCGCAGTCAC GACCATCGCG GGCGCGGACG GCGAGGACGG CGACACGGAC 
GGCCCCGCTG CATCAGCCCG GTTTCGCGCC GTGGATGGTC TCGCGGTCGA CAGTTCGGGC 
AACATCTTCG TCGTCGACAG GGGTGCGAGC ACCATCCGCA AGATATCCCA AGGTATCGTG 
ACGACGTTTG CCGGGATGCC GGGCGAAACC GGCCAAGATG ACGGCGCCGG GGCCGCCGCG 
CGATTTCGCG ACCCGATGGG GATCGTGATC GATGGGGCGG ACAACCTGTA TGTCGCGGAC 
ACGAATAATT GGAAAATCCG GAAAGTCACT CCCGCCGGAG TGGTCACGAC CTTCGCGGGC 
CATACGTCGA CCCAGGGCGC CAACGACGGG CCGATAGGCA TTGCGTCCTT CTTCAATCCC 
TACGGTTTGG CTATCGGCCC CAACGGCGCG CTGTACGTCG TCGACCTCGC CGGCGATACG 
CTTCGCATGA TCTCACCCGA CGGCTTCGTC ACCACCCTTG GAGGATCCTC AGCACACCGC 
GGCGAGACTG CGGACGGGAT CGGCACCGCC GCACGCTTCT ACGGGCCCAT GGGAGTGTCG 
GTGGACCGCT TCGGCATCAT CCACATCATC GAGTACTACA CCAACCTAGT CCGACGCGGC 
GTCCCCACCG GCGCGCGTAC CGCGGTGATC TCCAGCAATC CCGCGGAACA GCGCGTCGTG 
GAGGGAACTG CAGCTTCGTT TTCGGTGGCA GCGAGCGGGC TGCCAGCACC CCAGTTCCGC 
TGGGAACGAA AGCGAATCGG CGACACCACG TTCCTCCCGC TCGCCGAGGG TGGTGCTTAC 
GCCGGAGTGG AGACCAGCAC GCTGAAGGTG TCCTCCCCGA CTTTGATCAT GAACGGGGAG 
CTATACCGAT GCGTCGTCGA CAATGGCATT GGCGCCGCCG TTGCCTCCAC AAACGTGAGT 
CTGTTCGTAA TCGATCTGCC CGATATCACC ACTCAGCCAA CTAGCGCGAC AGTACGGCTC 
GGAGCGACGG TGCAGATGAC GGTGTCCGCC ACCTGCAGCA AGGCCATGAG CTACGAATGG 
TACCGGAACG GTGAAATCCT CTCCGGCGCG ACATCGCGGA CTCTGACGAT CCCGGACGCT 
GCTGCCTCCG AGGCCGGTCA GTACCACGTC CGGATTACCA CACCGGATAT CGCGGTCGAC 
AGCCAGTCCG CAGTCATCGC GGTGGAGGGC ACCACCCCTG TCGCGGGCAA CGGCCGGCTG 
GTTGGGCCGG ACATCGTTCA TGCCAACGGC CACATCTACG ACCAGGTGTT GCTCGAGGGC 
AAAGCGGTCG TCGTCACCGC CGATCAGCAG CAGATGACAC GCACGTCGTT CCTCGACTTG 
GATGGAGACA TCGTGCAGGT CGAGTTCAGC GGGTCCGGCT CACTGGCGGT GGTGCTGATG 
GACAACTCCG GGCCCGCGCA GCCCGAGAAA TACAACCAGA ATGTGAGCTA CGCGAAAGGA 
CACGCGGGCA TCGTGATCAC GGGTGCCGAC GAATCCACGA ACGTCTCGGT CTTCAGCGTG 
GGCTCGATCA CCGCAATCGA TCAGGGCCTC TTCCGCGCCG GCGTCGAGTA CGACGGCCTG 
GCTGACATCG GATTCATTCT GATTTCTAGC CGGAACGGCC GGTTTGGCGG AATCCGCACT 
GGGAATGCGG TCTATTTCGG ATCGGATGGT CTGACCGGTA TCTATGCGCC CGGCGTGCAA 
ATCGTCGGAC CGGTGGTCGT TGGGGACATC CTCGCGTTCG ATAACGCATC TCCAACGATG 
ATCTTCGGAG ACGCGAACGA CGTTCGGATC GCAGGTGGCG GAATGGATCA GCCGAATGGA 
CAACCGGTTC GCGTGAGCGG GATCAGCCAG ATCCGGTTTG TGGACGGCAT GAACTCGCAC 
GCCCGTCCGC TGCCGGCACA GCTTACCACC GCGCGATTCG AGCAGGACGG ACAAGATGTG 
ACCGACGCCA TCCTTGTGGG ACCCACTCAC TGA 

 

Protein sequence

MLPPYPIPRR DHLCAGKQHL LTTMRLWIPL AFCSALLCLA MHAQSYTFTT LAGEWNKGSR 
DGAAAVARFN GANGVAIAPN GLVYVADLAN STIRAITPAG VVTTLAGVAN VHGCIDGVGS 
NALFHNPSAL VVGPSGDLYV ADSNGHAIRK VTPAGVVTTL AGGPLRYGYM DGPGTEAQFS 
YPRGIAVNAT GVIFVSDRSA HTIRRVDQLG NVSTWAGHGG SAGSADGPGD QARFRDPEGL 
AIDAAGNVYV ADINNHTIRK INPAGEVTTL AGAAGESGFA DGPAANARFF CPTSLAIDPA 
GAIWVNDAIN RAIRKISPEG TVTTVADTAG EGITIDPNGV LYIAADDRIK RLESGSVLSV 
VAGPTDSYTS RNGVGANARF VQPIGSALAV DGNLYVTDSG GYAIRRVTRS GEVSTLAGLL 
GYPGFRDGSG YAAQFRDLRG ITPDKEGNLL VGDGRTIRKV TLAGAVTTIA GADGEDGDTD 
GPAASARFRA VDGLAVDSSG NIFVVDRGAS TIRKISQGIV TTFAGMPGET GQDDGAGAAA 
RFRDPMGIVI DGADNLYVAD TNNWKIRKVT PAGVVTTFAG HTSTQGANDG PIGIASFFNP 
YGLAIGPNGA LYVVDLAGDT LRMISPDGFV TTLGGSSAHR GETADGIGTA ARFYGPMGVS 
VDRFGIIHII EYYTNLVRRG VPTGARTAVI SSNPAEQRVV EGTAASFSVA ASGLPAPQFR 
WERKRIGDTT FLPLAEGGAY AGVETSTLKV SSPTLIMNGE LYRCVVDNGI GAAVASTNVS 
LFVIDLPDIT TQPTSATVRL GATVQMTVSA TCSKAMSYEW YRNGEILSGA TSRTLTIPDA 
AASEAGQYHV RITTPDIAVD SQSAVIAVEG TTPVAGNGRL VGPDIVHANG HIYDQVLLEG 
KAVVVTADQQ QMTRTSFLDL DGDIVQVEFS GSGSLAVVLM DNSGPAQPEK YNQNVSYAKG 
HAGIVITGAD ESTNVSVFSV GSITAIDQGL FRAGVEYDGL ADIGFILISS RNGRFGGIRT 
GNAVYFGSDG LTGIYAPGVQ IVGPVVVGDI LAFDNASPTM IFGDANDVRI AGGGMDQPNG 
QPVRVSGISQ IRFVDGMNSH ARPLPAQLTT ARFEQDGQDV TDAILVGPTH