| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0519 |
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| Symbol | |
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| ID | 6206225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 616642 |
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| End bp | 618078 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641690141 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001817409 |
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| Protein GI | 182412343 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGGC TGCTGCCACG CCTGCTGCTC GTGCTTGCCG TACTTTGTGC CGGCGTCGCG
GGCACCTTCG GCTGGCAGCG CTACTCCGCC GCCCGCCGTT GGGCAAAACT CCGTCCGCCC
GCGCCCGCCA CGCTGGGCAC CACCGCGCCT GGGTTTGACG CGCAGGTCGC GGCCTGCGCC
GCGAAGATTC AGGCATGGCC GCCCGATCAG GCCGCACTCG CCGAATTCGC CAACCTCTGC
CACGCGAACG GCCAGCTTGA ATCCGCCGCG GCCGCCTACG ACGTGTTGAT GCAGTTGCAG
CCGACCGAAG CCCGCTGGCC GCACCGGCTC GCGGTAATCG TCGCCGGCTA CGGCCAGCTC
GATCAGGCCA TCCCGCTGCT GCAGAAAACC ACGCAGCTCG CCCCCGATTA CATCGTCGCG
TGGCTCAAGC TCGGCGACGC GTATCTGAAG TCGAACGCCG TTCCGGAAGC CAGCGCCGCC
TACGACGAGG TGCTGCGCCG CGAACCGGAC AGCCGCTACG CGCTGATCGG CCTCGCGCGT
TGCGACCTGC TGTCCGAACG GCTTACCGCC GCGCGCGCGC ACCTGCAACG CGCGGTGGCG
GGCGTGACGG ATTTCGCCGG CGCACAGAGC CTGCTCGCCG TCGTGTTCGA CCGGCTCGGC
AACACGGAAG CCGCGGCTAC GGCCCGCAGT CGCGTGCAGC GCAGCGGGCA CTACACCGAG
CCGACAGACC CGTGGATGGA AGAACTGATG CTGCAATGCC ACGATCCTTA CGTGCTCCTC
ACCGCGGCCT CGACCGCGTG GGTCGAGGAA CGTGCCGAGC GGGCATTCGC GCTGCTCGAA
CGGGCGCTCA CGCTCGCGCC CGGCGATGCC CGGCTGCACC GGCAGATGGC CAAAATGCTC
AGCGCACGCG GCGATCTGGC CGGAGCCCGC CGCCATCTCG AGGAAGGCGT CGCGCTCGCG
CCGACCAATG ACTCCATCCA ACTCGACCTG ATCGGAATCC TCCATCAGTT GAACGACACC
GCGGCGCTGC AGCGCGTGGT TGCGGCGGGC CTTGCGGCGA ATCCTGAAAG CCCCGCGATG
CACTTCGAGG CCGGCATGGC CGCAGCCGCC GCGGGCCGGC TCGAGGAAGC CGCCCAACAC
CTCGAGTTCA CCTGGCGCAC CAGCCCCGAC CAGATCGCCG CGGCGATCGA GCTGGCGAAT
GTTTACTTTC GCGCCGGACG CGGCGACGAC GGCGTCGCGC TGCTGCAGGA CGCGATCACG
AAGTTTTCCC ACAAGCCCGC GCCGCTGCTG CTGGTGCTGA TTCGCCACGG CATCGAGACG
GGCGATCCAC GCACGCGCGA GTGGCTGCAG CAGGCCGTGG CGAGCGATCC GCCCGCCGGT
CTCCTCGCCG ACATCCGGCG CGACTATCAG CGCCGTTTCG GAGAGCCGCC GCCATGA
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| Protein sequence | MKRLLPRLLL VLAVLCAGVA GTFGWQRYSA ARRWAKLRPP APATLGTTAP GFDAQVAACA
AKIQAWPPDQ AALAEFANLC HANGQLESAA AAYDVLMQLQ PTEARWPHRL AVIVAGYGQL
DQAIPLLQKT TQLAPDYIVA WLKLGDAYLK SNAVPEASAA YDEVLRREPD SRYALIGLAR
CDLLSERLTA ARAHLQRAVA GVTDFAGAQS LLAVVFDRLG NTEAAATARS RVQRSGHYTE
PTDPWMEELM LQCHDPYVLL TAASTAWVEE RAERAFALLE RALTLAPGDA RLHRQMAKML
SARGDLAGAR RHLEEGVALA PTNDSIQLDL IGILHQLNDT AALQRVVAAG LAANPESPAM
HFEAGMAAAA AGRLEEAAQH LEFTWRTSPD QIAAAIELAN VYFRAGRGDD GVALLQDAIT
KFSHKPAPLL LVLIRHGIET GDPRTREWLQ QAVASDPPAG LLADIRRDYQ RRFGEPPP
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