| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0500 |
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| Symbol | |
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| ID | 6205337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 593820 |
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| End bp | 594776 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641690122 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_001817390 |
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| Protein GI | 182412324 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.645133 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.846515 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCCGCCC TGCCCGGCGC CGTTTCAATC GAAAATCTGA AATCCAAATT CGAAAATCCC
GACGTCCTCA CACTGCGCGA TCTCGACGCG TGGTCCTTCG CTGGGGTCGC GCTCGCGGTG
TTGGGCCAGC CGATCAAGCA TTCGATCAGC CCGGCGATGC ACCAGGCCGC GCTGGCGGAA
ATGGCGGCGC ACGACGCGCG GTTCTCGCAC TGGCGCTATT TTCGTTTCGA AGTCGCACCC
GCCGATCTCG CCGAAGCCCT CGCGCGATTG CACGCCGCGG GTTTTCTGGG CCTCAATCTG
ACCGTGCCGC ACAAGGTGCT CGCCGTCGAG CTGGTGAAAG ACGTCGCGCC CCACGCGCAG
CCGATCGGCG CCGTCAATAC CCTGCTGCGC ACGAACGATG GCTGGCGCGG CGATAACACC
GATGGTCATG GTCTCGCCCT GGGCTTGCGC GCGGACCTCG GACTCGATCT CGAAGGTGCG
CCCGTGATCC TGCTCGGCGC GGGTGGCGCC GCGCGGGGCG CGGCGGTCGA ATGCCTGCGT
CGCCGCTGCG CCTCGCTGGC GATCGTCAAC CGCACGCCAG CGCGACTCCA GGCGTTGCTC
GAATCGCTCG CGCCGCTCGC CGGGCCGACG CAGGTCCGCG GGTTCGCGCC GGACCAACTC
CCGCGTGATC TGCCCGCCGG CGCGATCGTG ATCAATGCCA CCAGCGCGGG GCTGCGCGCG
GCGGATCCCC TGCCACTCGA TCTCGCCCTG CTGCCACGGC CGGCGGGCGT CTACGACATG
ATCTACAATC CGCCGCGTAC GCCGCTGCTG CAGCTGGCCG CGCGGCTCGG ACTGCCACAC
GCCAACGGGC TCTCGATGCT CGTGCATCAA GGTGCGCGTT CGCTCGCGCT CTGGAGCGGC
ACCGAGGTTC CCGTTACGGC GATGAGTCGG GCCGCCCTGG CCGCACTGGC CCCGTGA
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| Protein sequence | MPALPGAVSI ENLKSKFENP DVLTLRDLDA WSFAGVALAV LGQPIKHSIS PAMHQAALAE
MAAHDARFSH WRYFRFEVAP ADLAEALARL HAAGFLGLNL TVPHKVLAVE LVKDVAPHAQ
PIGAVNTLLR TNDGWRGDNT DGHGLALGLR ADLGLDLEGA PVILLGAGGA ARGAAVECLR
RRCASLAIVN RTPARLQALL ESLAPLAGPT QVRGFAPDQL PRDLPAGAIV INATSAGLRA
ADPLPLDLAL LPRPAGVYDM IYNPPRTPLL QLAARLGLPH ANGLSMLVHQ GARSLALWSG
TEVPVTAMSR AALAALAP
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