| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0494 |
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| Symbol | |
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| ID | 6204526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 587932 |
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| End bp | 588738 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641690116 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001817384 |
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| Protein GI | 182412318 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.931297 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.454399 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCTGC CGCCCATCCT GTTTGAAGAC GATGCGATGA TCGCGTTCGA CAAGCCCAGC
GGACTGTTGA TCGCGCCCGA TCGCTGGGAC AAGCAGCGTG AAAACCTGAT GGGCCTCGTG
CACGCGCGCT TCGGCCATGG TGTCGCCAAC GTGCACCGGC TCGATGCGGA TACCAGCGGG
CTGTTGCTTT GCGCCAAGAC GAAGCCGGCG CTGGATTTTC TCAGCGGCCA GTTCCAGGCC
AAAACGGTGC AGAAAACCTA TCTCTCGCTC GTGGTGGTCC TGCCCCCGGA GGAGGCGATG
AAGGTGGTAA AGCCGATCCG CGACGACGCG GGCGGGCTGC CGGACGCGTT TCAGGTCGAT
TTGGCCTTGG GCCAGGACGA ACGGCAGCCA GGTCGGATGC GCGTGTTCAA AGGCCGCGGC
GGCAAGGACT GCGTCACCGA TTTTCGGGTG CTTGAGCGCT TTGGCCGGTT CGCGCTGGTC
TCGTGTCATC CGCAGACGGG CCGGACCCAC CAGATCCGGG TGCATCTGGC CGCGGCCGGG
GCCCCGATCC TCAACGATCC GTTTTACGGC AACCCGGAGA TCAAGCTGCT GCTTTCCGAC
CTGAAACGCC GCTACAAGGG CCGCGACGAG GAGAAGCCAC TCATCGACCG ACTGGCGCTC
CACGCGAGCG AGCTCACTTT CCGGCATCCT GCCACTCGCG AGTTGCTGAC GCTTCAGGCG
CCGTTGCCTC ACGAATTCGA GATTGCACTC AAATACCTGC GCAAATTCGC CGCGCCGGCG
TCACGTCGCC CGCCCGGAGC CCGCTGA
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| Protein sequence | MPLPPILFED DAMIAFDKPS GLLIAPDRWD KQRENLMGLV HARFGHGVAN VHRLDADTSG
LLLCAKTKPA LDFLSGQFQA KTVQKTYLSL VVVLPPEEAM KVVKPIRDDA GGLPDAFQVD
LALGQDERQP GRMRVFKGRG GKDCVTDFRV LERFGRFALV SCHPQTGRTH QIRVHLAAAG
APILNDPFYG NPEIKLLLSD LKRRYKGRDE EKPLIDRLAL HASELTFRHP ATRELLTLQA
PLPHEFEIAL KYLRKFAAPA SRRPPGAR
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