| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0492 |
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| Symbol | |
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| ID | 6207418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 584697 |
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| End bp | 586457 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641690114 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001817382 |
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| Protein GI | 182412316 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.154426 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCC GGCAACTCAT CCTCGGCCTT GTGCTGGTCG CCGCGACGGC GGTCGCGGGC
ACCGCGGCGT TCCGGCTCTG GCGCGAGCAA TCGCGTGCGG CGCGGGCGTG GGCGGCCCTG
CCGCCGACTC CGAATTTGAT TCGCTGGCCG GCCGAGATGG TGGCTGCCGT GCAGGAGGCG
GCTGCGGCCG TGCGCGCATC GCGCGACCCG GTGAAGCCGT TGGGCCAGCT CGCCATGCTC
TATGTCGCGA ATGGCTTCGG GAGCGAAGCC GAGCGGTTGC TGCACGCCCT GCGGCGATTG
CAGCCGAAGG AGGCGCGCTG GCCTTATCTG CTCGCCGAGC TGCACCGGCG CGCGGGCGAT
CGGGATCGCG TCGAGCAGGC GCTCGAGATG ACGGTCGCGC TCGCACCGGA CTACGCGCCG
GCCTGGCTGC GACTCGGTGA CCTGATGCTC GAACAGAAAC TGTTCGGCCG CGCGCAGCGC
TGTTTTCAGC AGGCGAGCCT CGTGGCTCCG GGCGAAGTGC GGACACGGTT CGCGGTGATC
GCCTTCGAGG CGCGGCACGG CCGGCGCACC GATCCGCGAC CAAGCTTGAT CGTGCTCGCC
CGCGATAATC CTGGCATTCG GGAACTGCAC GAACTCCTCG CGCAGTTGCA TGCGGCTGCA
GGCGATCCGG TTCGCGCCCA GCAAGAGCAG CGGCTGCTGG AGCGAGCGGA CCGGCGACTG
GGCATGCCGG ATCCGTGGAT GGAGGAGTTG CTCGAGCATT GCTATGAACC GAACCGGCTC
CAACGTGCCG CGCAGCGTTT CGCCGCGGAG AAACGACTGG ACCTCGCCGA ATCGCTGCTG
CGGCGCGCGA CCTCGTTGAG CCCGGCGGAT CCCACTCCGC GGTCGGCGCT GGCGCAGCTG
CTGGTGAGCA GCGAGCGGAT TCGCGATGCG CGCACCGTGC TCGAACAGGC GTTGGTGGAG
TGTCCCGACG AGCCGATGGT GCCGATCGCG CTGGCGCGCG TGCTCTGCCA GGAGCACAAG
CCGCTCGAGG CCGTGGCGAT TGCGCAGGCG GCGCTGGCCT GCTGGCCCGA ACACGCCGGG
TTGCACGCGG CGGTGGGTTA CGCATGGCGG GACGCCCGGG AGAACGAAAC CGCGCTGGCG
GCGCTGCGCG AGGCGCTGCG GCTCAACCCG ACGCTCGTCG AGGCGCAGTA CAACCTGGCT
TTTTGCCTGA TGGCCCTGCG CCAGCGCGAA GCCGCGCAGG TGGCGGTACA GCGGGCCCTG
ACCCTGCGGC CGGATTACCC GGAAGCGCTC GTCATGCTGG GCGGCCTCGA GCTGGACAAT
GGCGACGTCG CCGCGGCGCA ACGGCACATT CTCGCATTGT TTGAACTCCG GCCCGACGAG
CCCGGCTCGC GGCTGCTCTA CGCGGCACTG CATCACGAAC TCGGGAATCG CGCCCGTGAT
GAACGCAAAT TCGAAGAGGC CGATCGACGC TATCGCGCGG GGCTCGAGGT TTCGCCGCAG
TTCGCGCCCC TGCTGCACGA AGGGGCGTTG CTCGCAGCGC GGCGCGCCCA ATATGGCCAG
GTGGTCGAGT GGCTGGAACG TTATCTCCGG CTCGCGCCGC GCGATCTCGA GGCCTACATC
CTGCTCGCCG AGGCTTATCG CGAGATCCAG CGGCCAGAGT TGCTGGAACG TGCCCTGGAG
CGCGGCAGCG AAATGGCGGC GAAAATCGGT GACACGGCCA AGCATGCCGA ATTCGAGACG
CGTCTCGATC AACTCTACTG A
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| Protein sequence | MTRRQLILGL VLVAATAVAG TAAFRLWREQ SRAARAWAAL PPTPNLIRWP AEMVAAVQEA
AAAVRASRDP VKPLGQLAML YVANGFGSEA ERLLHALRRL QPKEARWPYL LAELHRRAGD
RDRVEQALEM TVALAPDYAP AWLRLGDLML EQKLFGRAQR CFQQASLVAP GEVRTRFAVI
AFEARHGRRT DPRPSLIVLA RDNPGIRELH ELLAQLHAAA GDPVRAQQEQ RLLERADRRL
GMPDPWMEEL LEHCYEPNRL QRAAQRFAAE KRLDLAESLL RRATSLSPAD PTPRSALAQL
LVSSERIRDA RTVLEQALVE CPDEPMVPIA LARVLCQEHK PLEAVAIAQA ALACWPEHAG
LHAAVGYAWR DARENETALA ALREALRLNP TLVEAQYNLA FCLMALRQRE AAQVAVQRAL
TLRPDYPEAL VMLGGLELDN GDVAAAQRHI LALFELRPDE PGSRLLYAAL HHELGNRARD
ERKFEEADRR YRAGLEVSPQ FAPLLHEGAL LAARRAQYGQ VVEWLERYLR LAPRDLEAYI
LLAEAYREIQ RPELLERALE RGSEMAAKIG DTAKHAEFET RLDQLY
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