| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0481 |
|---|
| Symbol | |
|---|
| ID | 6204525 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 566981 |
|---|
| End bp | 568339 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641690103 |
|---|
| Product | NADH dehydrogenase (quinone) |
|---|
| Protein accession | YP_001817371 |
|---|
| Protein GI | 182412305 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
|---|
| TIGRFAM ID | [TIGR01959] NADH-quinone oxidoreductase, F subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.253195 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGTTC CCGAACAACG CCGCATCATC TTTCGTCACA TCGACGAACC CGGCTACACC
AACGACATCG CCTGCTATCT GCGCAACGGC GGTTACGAGG TGATGAAGCG CGCGTTCACG
CGCCCGCCGC AGGAGCTGAT CGATGAGGTG AAGAAGTCCG GGCTGCGCGG TCGCGGTGGC
GCCGGTTTCC CGTGTGGTGT GAAGTGGGGG CTGGTCGACC GCAAGAGCGG CAAGCCGATC
TATCTCATCG TCAACGCGGA CGAGTCGGAG CCGGGCACGT TCAAGGATCG CTACATCATT
CATCAGGATC CGCACCAGCT GATCGAGGGC ACGATGATCT CGTGCTTCGC GAACAACGTT
CAGCAGGCCT ACATCTACAT CCGCGGCGAG TTCCCGCACG GCGCGCGGAT CCTCGAGCGC
GCGATCCAGG AGGCGCGCGA GCACAATTTC GTCGGCAAAA ACATCCTCGG CACGGCCTAC
TCGTGCGAGA TCTATGTGCA CCGGGGCGCC GGCGCCTACA TCTGCGGCGA AGAGACCGGG
CTGATCGAAT CGCTCGAAGG CAAACGCGCG TACCCGCGGA TCAAGCCGCC GTTCTTCCCG
GCGGTGCTCG GCGTTTACCA GTGCCCGACG ATCGTCAACA ACGTTGAGAC GCTCTGCCAC
GTGAAGTATA TCGCCGAGGT GGGCGGCGAG GCGTTTGCGA AGATCGGCAC GCCGAACAAC
ACCGGCACGC GGATCTTCTG CGTGAGCGGA CACGTGCAGC GACCGGGCTA CTACGAGTTC
GAGACCGGCA AGGTCACGCT CGGCCAACTG CTGAACGACG TCTGCGGCGG TCCATTGCCC
GGCCGCAAAT TCAAGGCCGT GATCCCCGGC GGCTCGTCGG CGAAGATCAT GCGCTTCGGC
GAACGCTACA AAGGCAAGCG GAAGGCGGGC ACGGAAATGG TCGACTACGA CTGGGGCGTC
GAGGACGTGC CGATGGACTT CGACTCGCTC GCGATGATCG GCACCATGGG CGGCTCCGGC
GGCGTGATCG TGATGGACGA CTCGGTGAAT ATGGTCGAGG CGCTCGCGAA CATCAACGCG
TTCTACTCCC ACGAGAGTTG CGGCCAGTGC ACGCCATGCC GCGAAGGCTC GCTCTGGATG
AAACGGATCA CGACGCGCAT GGTGCACGCC AACGCCCGCG AAGAAGACGC CGCGTTGCTG
AAGAGTGTCG CCGATCAGAT TCCCGGCCGG ACGATCTGTG CGTTCGGCGA GGCGTGCTCG
TGGCCGACGC AGAGCTTCGT TCAGAAATTC GGCGACGAAT TCAAAGCTTA CTACGAAACC
AAGAAGACGC GTCCCGCCGA CGCGCTGCCC CTGGTCTGA
|
|---|
| Protein sequence | MPVPEQRRII FRHIDEPGYT NDIACYLRNG GYEVMKRAFT RPPQELIDEV KKSGLRGRGG
AGFPCGVKWG LVDRKSGKPI YLIVNADESE PGTFKDRYII HQDPHQLIEG TMISCFANNV
QQAYIYIRGE FPHGARILER AIQEAREHNF VGKNILGTAY SCEIYVHRGA GAYICGEETG
LIESLEGKRA YPRIKPPFFP AVLGVYQCPT IVNNVETLCH VKYIAEVGGE AFAKIGTPNN
TGTRIFCVSG HVQRPGYYEF ETGKVTLGQL LNDVCGGPLP GRKFKAVIPG GSSAKIMRFG
ERYKGKRKAG TEMVDYDWGV EDVPMDFDSL AMIGTMGGSG GVIVMDDSVN MVEALANINA
FYSHESCGQC TPCREGSLWM KRITTRMVHA NAREEDAALL KSVADQIPGR TICAFGEACS
WPTQSFVQKF GDEFKAYYET KKTRPADALP LV
|
|---|
| |