| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0478 |
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| Symbol | |
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| ID | 6208459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 563071 |
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| End bp | 563613 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641690100 |
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| Product | NADH-quinone oxidoreductase, chain I |
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| Protein accession | YP_001817368 |
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| Protein GI | 182412302 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) |
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| TIGRFAM ID | [TIGR01971] NADH-quinone oxidoreductase, chain I |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.195582 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCGTCG TCCCCGTCGA ACGTAAGCCG CTCACTCTCG CCGAGCGCAC CTACATCCCG
CAAATCCTCG GCGGGCTGAA GACCACGTTC CGCCATCTCG TCCGCAAGAA GCAGACGATG
GAGTATCCGG AGCAGCGGCC GGCAATCCCG CCCGGCTATC GCGGCGTGCC CACGCTGGTG
AAGGATCCGA ACGGCCGCGA GAAATGCGTC TCCTGCCAGT TGTGCGAATT CGTCTGCCCG
CCGAAGGCGA TCCGGATCTG GCCGGGCGAG ATTGCCGCCG ATGCGCCGAC CGCGCACGTC
GAGCGCGCGC CACGCGAGTT CGAGATCGAC ATGCTCCGCT GCATCTACTG CGGCATGTGC
CAGGAGGTTT GTCCCGAGGA GGCGATTTTC CTGCAGCAGC AGTACACGAT GACCGGCTAC
ACCCGCGCCG AAATGGTCAA CAACAAGCAG CGGCTCTACG AGCTCGGCGG CACGCTGCCC
GACCAGCATT TCAAATGGGA CAAGAAGAAG GCCGCCGAGC TGCACAACAA GGCGCACCAC
TGA
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| Protein sequence | MPVVPVERKP LTLAERTYIP QILGGLKTTF RHLVRKKQTM EYPEQRPAIP PGYRGVPTLV
KDPNGREKCV SCQLCEFVCP PKAIRIWPGE IAADAPTAHV ERAPREFEID MLRCIYCGMC
QEVCPEEAIF LQQQYTMTGY TRAEMVNNKQ RLYELGGTLP DQHFKWDKKK AAELHNKAHH
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