| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0342 |
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| Symbol | |
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| ID | 6207809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 408519 |
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| End bp | 411083 |
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| Gene Length | 2565 bp |
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| Protein Length | 854 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641689964 |
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| Product | alpha amylase all-beta |
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| Protein accession | YP_001817232 |
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| Protein GI | 182412166 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACTG TTCCTGTCCG CTTCACCTAT TACACCAGCG TCGGTGGCGA GGCTTTCCCC
GGACACGTCG CGCTGCTCAC CGGCAACTGG GATGCGGCCG GCCGCGCTTC GCCGGACTGG
ACGCGCCGGC CGATGGAGCG ATTCGTCGCG GACGATGGCG GCACCGCTTT TCGCGCCACG
GTCGAGTTCG ACGCCGCGGA AGTGGGACAC GTTTTTCACT GGGGCGTCGT GCTGCGCGAT
CCCGCGGGTC GTGAACGCTG GGCGATCGCC ACCGAAACGC CGGACGTCGA CCGGATCGAG
CGACATCGGA CCTTCACGCT CACCGCCGCG CCCGGCAGCG AGGACTACTA CCTGGCGCAC
TGCCGCCGGC TCGGCTCTCA CAAGCGGCAC GGCGGCGCGC ACGCGGCCGC GCGCTTCGCG
GTCTGGGCGC CGAACGCCCG CCGCGTCGAC GTCGTGTTCG CCGCGGTCTG GAGCACGGAT
GATCCGACGC GCACGCCGAC GCGGGCCTCG CTGCCGATCG ATAAAATCTG CGGCGGCTAC
ATCGCGGACG ATGGCACCGG CATCGATCCC GCGTTGCCGG TGCTCGCGTT GCAGCGCGGA
TCGGGCGGCG TGTGGGAAAC GGATCCTCAC GATCCCGCGC TCGCGCGCTT CGCCGATTTC
CGCCATCGCG CCTATTTGTT TCGCATCGAG CAGGAGGACG GACGCGTCGC CTATCGCACC
GACTTGTATT CACGCTGCCA GCTCGGTTAC GGCCGCACCA ACCCGGCCAA AGCCACGCCC
GGGCAGCCGT GGCTCGGGCC GATCTCGACG CTCGACGGCG GCGTGAGCTG CACGACGGTG
GTGGACCTTG ACGAAGTGAC GCGTGATTTC GTCGAGCAGG ACCAGGTCTG GCCCGAGCGC
GTCACGATTC CCGCGGACGA GTTCTGGGCC GACGAATTTA CCGGACGCAA GGTGCCGACG
CGGGTCGAGG ACCTGATCAT CTACGAGCTT CACGTGGGCG CGCTTGGCTT CGGCCATGCG
GGACCCGGCA CGCTGCAGGA TGCCATGGAG CTGCTCGATC ACCTCTCGGC CCTGAACGTC
ACTGCCGTGG AGCTGCTGCC GATGTGTGAG TTCGGTGGTG CCGCGGAGAA CTGGGGCTAT
GCCACGTCGC ATTTCTTCGC GATCGAATAC AGCGAAGGCG GCCGCGACCA ATACAAGCAC
TTCATCAAGG AGTGCCATCG CCGCGGGCTC GCGGTGATCG TCGACATGGT TTACAACCAC
TTCGCCCACG AAGCCGAGCG CGCGGAATAC CACTACGATT CGAGCGCGCC GGAGAACGAC
ATTTACTACT GGTATGAGGG CCGGGCCACG GACTATCAGC GGCCTGACGG CACTCCGTTC
CCGGAAGGCG GCTACGTCGA CAACCTCTCG ACCGCGTTCG CGCCGCGCTA CTCCGAGGAG
ATGGTGCGAA AGCTGTTCAT CAGCAGCGCG GTCGCACTGG TGCGCGAATT TCACGTGGAC
GGACTGCGGC TGGACCAGAC CACCTCGATC CACGCCTACA ACGTCCTGCA CGCCGACGGC
CGCCCGGTCG GCGCCGCGAA TGCGTTCGGC GCGAAGCTGC TGCGCGAACT CGGGCGTACC
GTGCGGATGT TCAACCCCGA CGCGATCCTG ATCGCCGAGG ATCATTCGAC CTGGGACCAG
GTCACGCGGC CCGTGGACGA GGATGGCATG GGCTTCGACG CGCGCTGGTA TGCGGACTTC
TGCCACCATC TCGCCGGCGA CACGGACAAG GGCGCCGATT ACGCGAAACT GATCTATCAC
GCCGCGTTGC TCGGCGCCGG CGCGCCCGCG CAGCTCGACT ATTTTGCGGG CGCGCTCGCC
GCCTCGCGGT TGCAGGCGGT CGTCTACGCC GAGTCGCACG ATGAGGCCGG CAACAGCAAG
GGCCCGTTTT TCGACCCGAC CGCGACCGAC GCCGACAAGC AGCACACGTC GCATCGCTCG
CTGGTCGTGG CTTCGAACGA AGCGTCGCTC ATCGGCCCGA CGCGCGCCTA CGCCGAGGCG
CGTTGCCGCT ACGAATGGGG CGTCACCGTG CTCTCGGCCG GCACGCCGAT GCTGCTGTTC
GGCCAGGAAT GCGGCGCCGT GCAGCGGTTC AAATACAACG CCGTGCTCGC CGAGCGCGAG
GATCTCGCGA CGCTGCGGAG CGGCACCGGC GCCGCCCTCG TCCGGTTCTT CGCCGACCTC
AACCGGCTGC GGCGCGATCA CTCCGCGCTG CGCAGCCGGA ACATCGACGT GCTGCACGTG
CACAACGCCA ACCGCGTGCT CGCGTGGAAG CGCTGGGACG ACGCGCAATC GTTCCTCATC
GTCGCGAGTC TCAACGACGC CGCGTTCGAC CGTGGCTACA CGATCGAGCA CCCGCACATC
GAACCCGGCA CCTGGCGCGA AATCTTCAAC AGCGACTCGC GCCACTACGG CGGCGCCGAT
GTCGGCAACG GCGGCGGCTC AATCTGGACC GGCGGCGGCC GATTCTCGGC AGTTCTTCCG
TTTGCCGGGT TCGTCGTGTT CGCGCACGAA CGCAACCAGC CGTAG
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| Protein sequence | MATVPVRFTY YTSVGGEAFP GHVALLTGNW DAAGRASPDW TRRPMERFVA DDGGTAFRAT
VEFDAAEVGH VFHWGVVLRD PAGRERWAIA TETPDVDRIE RHRTFTLTAA PGSEDYYLAH
CRRLGSHKRH GGAHAAARFA VWAPNARRVD VVFAAVWSTD DPTRTPTRAS LPIDKICGGY
IADDGTGIDP ALPVLALQRG SGGVWETDPH DPALARFADF RHRAYLFRIE QEDGRVAYRT
DLYSRCQLGY GRTNPAKATP GQPWLGPIST LDGGVSCTTV VDLDEVTRDF VEQDQVWPER
VTIPADEFWA DEFTGRKVPT RVEDLIIYEL HVGALGFGHA GPGTLQDAME LLDHLSALNV
TAVELLPMCE FGGAAENWGY ATSHFFAIEY SEGGRDQYKH FIKECHRRGL AVIVDMVYNH
FAHEAERAEY HYDSSAPEND IYYWYEGRAT DYQRPDGTPF PEGGYVDNLS TAFAPRYSEE
MVRKLFISSA VALVREFHVD GLRLDQTTSI HAYNVLHADG RPVGAANAFG AKLLRELGRT
VRMFNPDAIL IAEDHSTWDQ VTRPVDEDGM GFDARWYADF CHHLAGDTDK GADYAKLIYH
AALLGAGAPA QLDYFAGALA ASRLQAVVYA ESHDEAGNSK GPFFDPTATD ADKQHTSHRS
LVVASNEASL IGPTRAYAEA RCRYEWGVTV LSAGTPMLLF GQECGAVQRF KYNAVLAERE
DLATLRSGTG AALVRFFADL NRLRRDHSAL RSRNIDVLHV HNANRVLAWK RWDDAQSFLI
VASLNDAAFD RGYTIEHPHI EPGTWREIFN SDSRHYGGAD VGNGGGSIWT GGGRFSAVLP
FAGFVVFAHE RNQP
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