| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0123 |
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| Symbol | |
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| ID | 6208889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 148701 |
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| End bp | 150959 |
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| Gene Length | 2259 bp |
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| Protein Length | 752 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641689744 |
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| Product | integral membrane protein-like protein |
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| Protein accession | YP_001817014 |
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| Protein GI | 182411948 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.377 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.313972 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCCGT TCGCCTTCTC GATCTTCACC GGCGCGTTTC TGTTGTTCGC GGTGCAACCG
TTGGTCGGCA AGTATATCCT TCCGTGGTTC GGCGGCGGAC CGGGAGTGTG GAACACCTGC
CTCCTGTTCT TCCAGACCGC ATTGCTCGGC GGGTATGCCT ACGCGCACCT GACCTCCACA
CGGTTGACGC CGCGCCGGCA GGCAATCCTA CACCTGATGC TGCTGGCGGC CGCGTTGTTG
CTGCTGCCCA TCGTGCCCGG CGCGCAGTGG AAGCCTCAGG GCGACGCCAA CCCCACCTGG
CGTATCCTGC TCTTGCTGAC CGCGACAGTC GGCTTGCCTT ACTTCGTGCT CTCGGCGACG
GGGCCCTTGA TGCAGCAGTG GTTCAGCTTG GTGCAGGCGG GCCGCTCGCC GTATCGACTC
TACGCGCTTT CCAACGTCGG TTCGCTGCTC GCGCTGTTGT CGTACCCGTT CTATTTCGAA
CGCGAGTTCA CCCGGCAGGC GCAAGGGCAG CTGTGGTCCG TGGGCCTTGG CGTCTACGCC
CTGGCCTGTG TCTGGTGCGC CTGGCAGCTG TGGCGGCGCG CGCCCGCGGG CGCACCGGCC
CGTGTGGCAG CCGGCGATTC ACCACCCGTG TCGCCGCTGG ACCGCTTGTT GTGGTTCATG
CTCGCAGCCA TCGCGTCCAT GCTGCTGCTG GCGACCACGA ACAAGCTTTG CCAGGACCTC
GCCGTCATTC CGTTCCTATG GATTCTGCCG CTCAGCCTTT ATCTGCTGAG CTTCATTCTG
TGCTTCGATC ACCCGCGTTG GTACTCCCGC ACTGGTTTCA CCGCGCTGTT CGTACTGGGC
GCGTTCGTGG ACGTGCACCT GCTTTTCGCC GGCCACAACG CCCGGCTCGT CCAACAGGTG
CTCGGCTACT CCACCACGCT CTTCGCCGCG TGCATGCTGT GTCACGGCGA GTTGTTCCGG
CTGCGCCCAC CGCCGGCCCG GCTCACGTCG TTCTACCTGC TCATCGCGGC GGGCGGCGCC
ACGGGCGGCT TCGTCGTCGC CGTGCTCGCG CCGCTCACCT TCGACCGTTA CCTGGAACTG
CAGATCGGGC TGTGGCTGCT AAGTTATCTG TTGGCCGTAC TCGCTTATCG GCATCGCAGC
CGGGCGTTCG CGGTTGGCAC CGCCCTCGGA GCCGTCTTGT CGGTCGTCGT CGTGCCGGCA
CTCAAGGCGG CGGCGAGCCG CGATGTCGAC CCGTGGACGG GATTCGTCGA ACAAGTCACC
AGCTTCGGCC GCTCCTACTG GGCCTACGCC CTGCTCGGGG CGGTCGTCTT CCTGATTGGA
TTCGTCAGCC GCCGCGGTTT CGTGCGCGAG TGGCAGGCCT CGATCGCCCA TTTCGTCATG
ATTTTTTCCA TCGGGCTGGG CGGGCTGATG ATCGTTCAGA TTCGCCGCGA CAGCGGCGAC
GCCATCGTGA CGACGCGTGA CTTCTACGGC GTGCTGAAGG TGTTTGATCA CAACCCCGGC
GATGCCGACC TGCACTACCG CACGCTGGTC CACGGCGTCA CCTCACATGG GCTCCAGCTC
ATGCAGCCGC CGCAGGCGGA CTGGACCACC ACCTACTACA CCGAGCGCAG CGGCATCGGG
CTCGCGGTCG CTCACATGAA CCGCGATCAG CGGCATCTTC CCCGCCGGAT CGGGCTGGTC
GGACTGGGCA CCGGCACGGT GGCGATGTAC GGCCAATCCG GCGACGAGGT ACGGATCTAT
GAGATCGATC CCCAGGTCGA GCGGCTCGCG CGGTCGCACT TCAGCTACCT GGCCCGCACT
CCCGCCGCGG TCACCGTGGT GCTGGGTGAC GCCCGGCTCT CGATGGAACG CGAGCTCGAG
CGCGGCGAAG AACAGCAGTT CGATATTCTT GCCCTCGACG CCTTCAGCAG TGACGCCATC
CCCGCCCACC TGCTCACGAC CGAAGCGTTC GGCATCTATC TGCGTCACCT CAAGCGCAAC
GGTGTCATCG CCGTGCACAC CTCGAATCGA TATCTCGATC TGGAGCCGGT GGTCGTGAAC
GCGGCGAAGC ACTTCAAACT CGGCTGGGCG GTGATCTCCG ACAACCCACC CGACAAGCAG
TGGTGGGTGT TTCGCTCCAC ATGGATTCTG CTGACCCGCG ACGAATCGCT GCTCACCAGT
GACGCCGTGA CGGAGCACAC CGACACCTAT GTGCCGAGCA CGCGCCAAGC GAAGCTCTGG
ACCGACGATC ACGCGAGCCT CTACGAAGTT CTAAAGTAG
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| Protein sequence | MLPFAFSIFT GAFLLFAVQP LVGKYILPWF GGGPGVWNTC LLFFQTALLG GYAYAHLTST
RLTPRRQAIL HLMLLAAALL LLPIVPGAQW KPQGDANPTW RILLLLTATV GLPYFVLSAT
GPLMQQWFSL VQAGRSPYRL YALSNVGSLL ALLSYPFYFE REFTRQAQGQ LWSVGLGVYA
LACVWCAWQL WRRAPAGAPA RVAAGDSPPV SPLDRLLWFM LAAIASMLLL ATTNKLCQDL
AVIPFLWILP LSLYLLSFIL CFDHPRWYSR TGFTALFVLG AFVDVHLLFA GHNARLVQQV
LGYSTTLFAA CMLCHGELFR LRPPPARLTS FYLLIAAGGA TGGFVVAVLA PLTFDRYLEL
QIGLWLLSYL LAVLAYRHRS RAFAVGTALG AVLSVVVVPA LKAAASRDVD PWTGFVEQVT
SFGRSYWAYA LLGAVVFLIG FVSRRGFVRE WQASIAHFVM IFSIGLGGLM IVQIRRDSGD
AIVTTRDFYG VLKVFDHNPG DADLHYRTLV HGVTSHGLQL MQPPQADWTT TYYTERSGIG
LAVAHMNRDQ RHLPRRIGLV GLGTGTVAMY GQSGDEVRIY EIDPQVERLA RSHFSYLART
PAAVTVVLGD ARLSMERELE RGEEQQFDIL ALDAFSSDAI PAHLLTTEAF GIYLRHLKRN
GVIAVHTSNR YLDLEPVVVN AAKHFKLGWA VISDNPPDKQ WWVFRSTWIL LTRDESLLTS
DAVTEHTDTY VPSTRQAKLW TDDHASLYEV LK
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