Gene Oter_0019 details

Gene Information

• Locus tag: Oter_0019
• ID: 6207784
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Opitutus terrae PB90-1
• Kingdom: Bacteria
• Replicon accession: NC_010571
• Strand: +
• Start bp: 22672
• End bp: 23202
• Gene Length: 531 bp
• Protein Length: 176 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 641689640
• Product: transcription activator effector binding
• Protein accession: YP_001816911
• Protein GI: 182411845

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.833859
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 8
• Fosmid unclonability p-value: 0.221599
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGCGAGC TGGCTTTACA CATCGAACGG CTCCCGCGGA TGCACGTCGC CACGGTGCGC 
GCCGTCAGCG CCACGCCGGA AAAGGATGCG TGGCAAAAAC TCCGTGCATG GGCCGAACCG 
CGCGGGCTGC TGCGACAGCC CAAGCTCCAT CCGGTTTTCG GTTTCAACAA TCCCGGACCC 
GCGCCAGGCC ATTCCGCCTA CGGCTACGAG TTTTGGATTC GCGTCGATCC GCATTCGCAC 
CCGGCCGGCG ACGTCGAGCT AAAGGAGTTC CCCGGCGGGC TTTATGCCGT AACGACTTGC 
CGGCTGGTCA GCGATCCGGC AGGGCCGCTT GGTGAGGTCT GGCGGCGGCT GTGGGATCAG 
GTGCAGGCCG GCCCCTACCG CTGGCGCCGC ACCCACGAAC TCGAGCACCC GCACGATCCG 
CTCGCGACCG ACGCCGTCAT GGTGCTCGAC CTCTATTTGC CGATCGAGCC CTGCGAAACC 
CCGCCCGAAC CGCCGCCTTC GGATCCCCAA GGTGACCCGG ACGCGGCATA A 

 

Protein sequence

MSELALHIER LPRMHVATVR AVSATPEKDA WQKLRAWAEP RGLLRQPKLH PVFGFNNPGP 
APGHSAYGYE FWIRVDPHSH PAGDVELKEF PGGLYAVTTC RLVSDPAGPL GEVWRRLWDQ 
VQAGPYRWRR THELEHPHDP LATDAVMVLD LYLPIEPCET PPEPPPSDPQ GDPDAA