| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6428 |
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| Symbol | |
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| ID | 6182239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 1037889 |
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| End bp | 1039970 |
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| Gene Length | 2082 bp |
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| Protein Length | 693 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641689551 |
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| Product | phospholipase D/transphosphatidylase |
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| Protein accession | YP_001816410 |
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| Protein GI | 172065698 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.57385 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGATA CCAATACCCA AAACAAATCG AAGGCGCCGG TCGACGTTTC CACACGTCAA
TCGGTCGCCA GTGCGCAGTG GTTTCTGGAG AAGAATGAGA CCTACTATGC ACCGCCGTAT
GCGAAGAACA ATCTCGACGT GTTCATTTGC GGCGAGGATG CGTTCAAACA GATCGCAGCC
GATTTGAAGG CAGCCAAGCA CAGCGTGGAA ATCATCTGTT GGGGTTTCGA TCCGGGCATG
GAACTGATCC GGAATGGTTC GGTGTGGCCG CGAGGAGATA CCTGGGGCGG GTTGCTGCGC
GATGTGGCCG CGGGAAAATT CAACAATGGC AAACCGGTTC AGGTTCGTTT GCTGTCGTGG
TACGGGTTTA TCGGAAGTCT TGGTTCGAAC AACATGCCGG GACACAGCAG TGGTCGTTTG
AACTACGAAG AAAAGATGGC CATGATGGTC GGTGCGGGCG GCGGCATCTA TTTGCCGACC
GGCAAGCCAC CTCAACCGCA GACACCGCAG GAGCGGCGCG AGGATTTCAA TGCGCGCTGG
TACGACGACG CGTTTGCGGG GCGGCTGGCC AATCTGTCGA TTCGGACTCG GGATGGCAGT
AGCAAGGCTG TTCATGACAG TCTCGCAGGC GAGCCGGGGA AGCGTGACTT CACCGAAGTG
CTGGGTCTGG AGAAAGTGGC CACCGACCAT CAGAAGACCA TCCTGATCGA CTACGAATAC
GAAGGGGGGG CACACGCAGT CGGTTATGTG ATGGGGCTGA ACAGCGTGAC TGACTACTGG
GATACGCAGC AGCATCTCTT CAACGATCCA CGCCGCGGAG AGTCATGGGA GGGTGCCAAT
GACGTGCAGC CTGGCCTGAA GCCGTATCAG GATTACGCGA GCCGTATTCG AGGCGAAGCA
CTGGTGGCAG TCAGCAAGAA CTTCATTGAT GCGTGGAACC GCGCCAAGGG CAAAGGTGCG
AACGTATCGC GAACGCACGA TTTCAAAAAG GTGCCGCCGG GATTGACGCA GAATCTCGGC
ACACCGTGCC AGCGGGCGCA AGTCGTGCGC ACTCAGCCCG AAGAAAAGGA CAAATCCATC
AAGGCCTTGT ATGAGCAGGC CACGTCCTTT GCACGCAGCT ATATCTACGT CGAGAACCAG
TATTTCCAAT ATACCGAGTG GCCGAAGAAA CTGAAGGAAT TGCGAACGCA GTTTCTGTCG
TGCAGTCAGG CTGCTGGCAA GAGTCCTGTC GATATACCCA ATTTGCACGT GTTGGTTGTC
ATCCCTACAC CGGAGCGTGC ACAGATGGTG CCGCGAACCC ATGACACCGT TAAGGTGCTG
GGCCACGGTA CGTCAATGCC CAATCAGGAC AAGGCAATCG AAGACGAACT GGCACGCAAC
CGGCAGCAGC AGGCGACCTG GGACGCTTAT GTCAAACGAC AGAAGGCGAG TGGGGCGAGG
ATTGATCCCG ATCTTTACCC TGCACCGCTC TCTCCTGTTG CACAAAGCGC AAAGGATCTC
GGCGACAAGG CTTCCCTTTC CAAGTCGCTG GATCAAATGG GAATCCGCGC ACTGATCGGT
AGCCTCTGGA CATTCGATAG TAACTGGCGT AGCTCAACGT TGAGCACGGA GACGGCGAAG
CAGCAAGCTC GCTGGGATGA ATATGTGAAG AAGCAACAAG CCAAAGGCGA GTTGCCGGAC
CCGGATCTGG CGCCGATGCT GCCGTTGCCA ACGCAGTCGA TAGCTGCCCG GTATAGAGAG
ATCTATATTC ACAGTAAACT CCTGCTGATC GATGATAGTT TTTTCACGTT GGGGAGTGCC
AACCTGAATT TGCGGAGCAT GGCGGTGGAC GCAGAGATCA ATATAGGAAC TGATGATCCA
GCGAAGAGTG AAGATTTGCG CAAGCGGGTA TGGAAACTTC ACACTGGAAA CGCAGCGGAT
TGCAATCCGG CATCGCTCAC TCCGAAGGCC ATGGCCAAGA CATTCATTAA CTGGGTGCAA
TTGTTGAGGG CGAATGAAAT CGCACGGAAG AAGGGGGATG CTCCCACGGG CTTTCTGCAT
CCGTTCCATG ATGAGCGCGC GACAGGTGTT CGCCTTTCCT GA
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| Protein sequence | MSDTNTQNKS KAPVDVSTRQ SVASAQWFLE KNETYYAPPY AKNNLDVFIC GEDAFKQIAA
DLKAAKHSVE IICWGFDPGM ELIRNGSVWP RGDTWGGLLR DVAAGKFNNG KPVQVRLLSW
YGFIGSLGSN NMPGHSSGRL NYEEKMAMMV GAGGGIYLPT GKPPQPQTPQ ERREDFNARW
YDDAFAGRLA NLSIRTRDGS SKAVHDSLAG EPGKRDFTEV LGLEKVATDH QKTILIDYEY
EGGAHAVGYV MGLNSVTDYW DTQQHLFNDP RRGESWEGAN DVQPGLKPYQ DYASRIRGEA
LVAVSKNFID AWNRAKGKGA NVSRTHDFKK VPPGLTQNLG TPCQRAQVVR TQPEEKDKSI
KALYEQATSF ARSYIYVENQ YFQYTEWPKK LKELRTQFLS CSQAAGKSPV DIPNLHVLVV
IPTPERAQMV PRTHDTVKVL GHGTSMPNQD KAIEDELARN RQQQATWDAY VKRQKASGAR
IDPDLYPAPL SPVAQSAKDL GDKASLSKSL DQMGIRALIG SLWTFDSNWR SSTLSTETAK
QQARWDEYVK KQQAKGELPD PDLAPMLPLP TQSIAARYRE IYIHSKLLLI DDSFFTLGSA
NLNLRSMAVD AEINIGTDDP AKSEDLRKRV WKLHTGNAAD CNPASLTPKA MAKTFINWVQ
LLRANEIARK KGDAPTGFLH PFHDERATGV RLS
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