| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6423 |
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| Symbol | |
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| ID | 6182234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 1033155 |
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| End bp | 1033592 |
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| Gene Length | 438 bp |
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| Protein Length | 145 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641689546 |
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| Product | endoribonuclease L-PSP |
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| Protein accession | YP_001816405 |
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| Protein GI | 172065693 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.954317 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCCAGC CTACCCATAC CCGTATCCGC ATGTTCAACA CGAAGGATAC CTACCCGAAC
CAGACGCTCG ACAACGACCT GTGCCAGGCC GTGCGCGCCG GCAACACCGT CTACGTACGC
GGCCAGGTCG GCACCGATTT CGACGGCAAT CTGATCGGCC TCGGCGATCC GCGCGCGCAG
GCCGAGCAGG CGATGAAGAA CGTGAAGCAG TTGCTCGAGG AAGCGGGCAG CGACATCACG
CACATCGTGA AGACGACGAC CTACCTGATC GACCCGCGCT ATCGCGAGCC GGTGTACCAG
GAAGTCGGCA AGTGGCTGAA GGGCGTCTAT CCGATCTCGA CGGGGCTCGT CGTCTCGGCA
CTCGGCCAGC CGCAGTGGCT GATGGAGATC GACGTAATCG CGGTGATCCC GGACAACTGG
CAGCCGAACC GCGCATAG
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| Protein sequence | MSQPTHTRIR MFNTKDTYPN QTLDNDLCQA VRAGNTVYVR GQVGTDFDGN LIGLGDPRAQ
AEQAMKNVKQ LLEEAGSDIT HIVKTTTYLI DPRYREPVYQ EVGKWLKGVY PISTGLVVSA
LGQPQWLMEI DVIAVIPDNW QPNRA
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