| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6418 |
|---|
| Symbol | |
|---|
| ID | 6182229 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010557 |
|---|
| Strand | + |
|---|
| Start bp | 1026131 |
|---|
| End bp | 1028410 |
|---|
| Gene Length | 2280 bp |
|---|
| Protein Length | 759 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641689541 |
|---|
| Product | oxidoreductase alpha (molybdopterin) subunit |
|---|
| Protein accession | YP_001816400 |
|---|
| Protein GI | 172065688 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01701] oxidoreductase alpha (molybdopterin) subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.761989 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.370135 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAAATC GACGCGAAGT GCCTGGCATC AGGAAGTACG ATGGGCCCGC CGGCGGTTGG
GGCGCGCTTC GCGCGACAGC CGAGGCCGTG CGCACGCAAA TGGAAACGAT CGAGGCGCCG
ATCGTGCTGA TGCGGACCAA CCAGCCCGAC GGCTTCGACT GCCCCGGCTG CGCGTGGCCC
GACAAGGAAC ACAAGTCGAC ATTCCAGTTC TGCGAGAACG GCGCGAAGGC CGTCACGTGG
GAAGCGACCA CCAAGCGCGT GACACCCGAG TTCTTCGCGG CGAACCCGGT GTCGTCGCTA
CTGCGGATGT CCGACTACGA GCTGGAGAAC ATGGGCCGGC TCACGCATCC GCTCGTCTAC
GATCGCGCAA CCGACACGTT TCGCGCGGTC GAATGGGACG ATGCGTTCGC GCGCATCGGC
GAGGTGCTGC GCGCGCTGCC GCCCGAGCAG GTCGAGTTCT ACACGTCGGG CCGCGCGTCG
AACGAAGCCG CCTACCTGTA TCAGCTGTTC GCGCGCGAGC TCGGCACCAA CAACTTCCCC
GACTGCTCGA ACATGTGCCA CGAGCCGACC AGCGTCGGCC TGCCGCAGTC GATCGGGATC
GGCAAGGGCA CCGTGTCGCT CGAGGATTTC GACCACTGCG AGCTGATCAT CTCGATCGGC
CACAACCCCG GCACCAACCA TCCGCGGATG ATGGGCACGC TGCACGAGTG TGCGCGCCGC
AACGTGCCGA TCATCGTGTT CAATCCGCTG CGCGAACGCG CGCTCGAACG CTTCGCGGAT
CCGCAGGACA TGATCGAGAT GGCGTCGTTC GGCTCGACGC GCATCGCGTC GACGTACTAC
CAGGTCGACG CGGGCGGCGA CGCGGCCGCG CTGAAGGGCA TCATGAAGGC GCTGCTGCAG
CTCGAGGCCG AGCGCGGCGA CGTGCTCGAC AAGGATTTCA TCGCGCAGCA CACGAGCGGC
TTCGACGCAT TCAGCGCCGA CCTTGAAGCC ACGTCGTGGG ACGACATCGA GCGCGCGAGC
GGCTTGAGCC AGGCGCAGCT CGAACAGGTC GCGCTCGCGT ATGCGAAGTC GAACGCGACG
ATCGTCACGT ACGGAATGGG CGTCACGCAG CACAACAAGG GCACCGCCAC CGTGCGCCTG
ATCGCCGACC TGCTGTTGAT GCGCGGCAAC ATCGGCAAGC CCGGCGCGGG CGTGTGCCCG
CTGCGCGGCC ACTCGAACGT GCAGGGCAAC CGCACGGTCG GCATCACCGA GAAGCCGTCG
GCCGAGTTCC TGCAGAAGAT CGAGGACGTG TGCGGCTTCA AGCCGCCCGC ACAGCACGGA
CACGATGCCG TGCAGGCGAT GCAGGCCATG ATCGACGGCC AGGCCAAGGC GCTGCTGTGC
CTCGGCGGCA ACTTCGCGGT CGCGCTGCCC GATCCCGAGC AGTCGTTCCC CGCGATGGCG
AAGCTCGATC TCAGCGTGCA TCTCGGCACG AAGCTGAACC GCTCGCATCT GCTCGTCGCG
AAGGAAACCT ACATCCTGCC CGTGCTCGGC CGCACCGAGC TCGACATGCA GGCGAGCGGC
CGGCAGTCGA TCACCGTCGA GGATTCGATG TCGATGGTCC ACGCATCGGC CGGCAAGCTG
AAGCCCGCGT CCGACCAGCT GCGCTCCGAG CCCGCGATCG TCGCCGGAAT CGCTCACGCG
ACGCTGCCGG CCAGCAAGGT CGCGTGGCTC GACCTGATCG CCGACTACGA CCGCATCCGC
GACCTGATCG ACCGCACGGT CGCCGGTTTC GAGGCGTTCA ACGAGCGCAT CCGCACGCCG
GGCGGCTTCC GCCTGCCGCT GCCGCCGACC GAGCGCGTAT GGCCCACGGC CACCGGCAAG
GCGATGTTCT CGATCTACAA GGGCGTGAAG GAAGACGCGG ACGTGCTCGG CGCCGAGCAG
GTGCTGCGGC TGATCACGCT GCGCAGCCAC GACCAGTACA ACACGACGAT CTACGGGCTC
GACGACCGCT ATCGCGGCGT GTTCGGACGA CGCGACGTGC TGTTCATGAA CGCGGCGGAC
CTCGCGAAGT ACGGGCTCGA ACACGGCGAC CTCGTCGACA TCGAGACGGT TACCGCGTCG
GGCCGCACGC TGCGCCTCGA GAAGATCACC GCGATCGAGT ACGACATCGC GCCGGGATCG
GTCGGCGCGT ATTATCCGGA AGCGAACGTG CTCGTGCCGC TCGACTACAT CGACAAGGAA
AGCGGCACAC CGTCGTACAA ATCGGTGCCG GTGCGCGTCG CGCGCTCGGC GGTCGTCTGA
|
|---|
| Protein sequence | MTNRREVPGI RKYDGPAGGW GALRATAEAV RTQMETIEAP IVLMRTNQPD GFDCPGCAWP
DKEHKSTFQF CENGAKAVTW EATTKRVTPE FFAANPVSSL LRMSDYELEN MGRLTHPLVY
DRATDTFRAV EWDDAFARIG EVLRALPPEQ VEFYTSGRAS NEAAYLYQLF ARELGTNNFP
DCSNMCHEPT SVGLPQSIGI GKGTVSLEDF DHCELIISIG HNPGTNHPRM MGTLHECARR
NVPIIVFNPL RERALERFAD PQDMIEMASF GSTRIASTYY QVDAGGDAAA LKGIMKALLQ
LEAERGDVLD KDFIAQHTSG FDAFSADLEA TSWDDIERAS GLSQAQLEQV ALAYAKSNAT
IVTYGMGVTQ HNKGTATVRL IADLLLMRGN IGKPGAGVCP LRGHSNVQGN RTVGITEKPS
AEFLQKIEDV CGFKPPAQHG HDAVQAMQAM IDGQAKALLC LGGNFAVALP DPEQSFPAMA
KLDLSVHLGT KLNRSHLLVA KETYILPVLG RTELDMQASG RQSITVEDSM SMVHASAGKL
KPASDQLRSE PAIVAGIAHA TLPASKVAWL DLIADYDRIR DLIDRTVAGF EAFNERIRTP
GGFRLPLPPT ERVWPTATGK AMFSIYKGVK EDADVLGAEQ VLRLITLRSH DQYNTTIYGL
DDRYRGVFGR RDVLFMNAAD LAKYGLEHGD LVDIETVTAS GRTLRLEKIT AIEYDIAPGS
VGAYYPEANV LVPLDYIDKE SGTPSYKSVP VRVARSAVV
|
|---|
| |