| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6387 |
|---|
| Symbol | |
|---|
| ID | 6182152 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010557 |
|---|
| Strand | - |
|---|
| Start bp | 989924 |
|---|
| End bp | 990328 |
|---|
| Gene Length | 405 bp |
|---|
| Protein Length | 134 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641689511 |
|---|
| Product | transport-associated |
|---|
| Protein accession | YP_001816370 |
|---|
| Protein GI | 172065658 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2823] Predicted periplasmic or secreted lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.508762 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGTAT TCCCGCTGCA AGCCCGCGCA CCGCGCTTTC GCCGTCGTCC CGCGACGCGC
CTCGGGATGG CGGTCGCGAT CGCCGCGGCC GTCGCGTGCA CGGCCGTCGC GCCGAACGTG
TTCGCCGCCG GCGACGACGG CGCATCGTCA TCCATGTCGT CGTCGACGCA TACGAGCACC
GGCGCGAAGA TCCGCGACGC GACCATCACG ACCAAGGCCA AGGCCGAACT GGTCGGCACG
AGCGGCCTGT CGGCCGGCGA CATTCACGTG AAGACGCGTC ACGGCATCGT GATGCTCACC
GGCAGCGTGC CGGACGAACA GCAGCGCACG CAGGCGGTGA GTGTCGTCAA GCAGATCGAG
GGCGTGCAGG ACGTGCGCGA CCAGTTGACC ATCCGCCCGA AATAA
|
|---|
| Protein sequence | MKVFPLQARA PRFRRRPATR LGMAVAIAAA VACTAVAPNV FAAGDDGASS SMSSSTHTST
GAKIRDATIT TKAKAELVGT SGLSAGDIHV KTRHGIVMLT GSVPDEQQRT QAVSVVKQIE
GVQDVRDQLT IRPK
|
|---|
| |