Gene BamMC406_6236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_6236 
Symbol 
ID6182371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp823647 
End bp825011 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content62% 
IMG OID641689364 
Productmajor facilitator transporter 
Protein accessionYP_001816223 
Protein GI172065511 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCCA TGCAATCCGC GGCCACGCCC ATCTCCGACG AGGAAGCCCG GCGCCAGTTG 
CACCGCGCCG TCATCGCCAG CACGATTGGC ACGACGATCG AATGGTATGA CTTCTTCCTC
TACAGCACGG TCACCGGCCT GGTCTTCGCA AAGCTGTATT TCCCCCAATC CCATCCACTC
GTCGGCACGC TGCAGGCGTT CTTGATCTAT GCCGTCGGCT TTGTCGCACG GCCGGTCGGC
GCGGCGATCT TCGGCAATTA CGGCGACCGC ATCGGACGCA AGGCCACGCT GATCGTGACC
CTGCTGCTGA TGGGATTCGC CACGTTCGCC GTGGCATTCG TTCCGACCTA CGCTGCGATC
GGTATCTGGG GCGCCGTTAT CCTCACGGTA CTGCGCTTCA TCCAGGGCGT CGGCGTGGGC
GGCGAATGGG GCGGCTCGGT CCTGATGTCG ATGGAGTGGG CGCGCACCAA TACGCATCGC
GGCTTCGTCG CGTCGTGGCC GCAATTCGGC GTGCCTGCGG GGTTGTTCCT CGCCAACCTT
GCCGTGCTGG CCATGAGCTG GTTTTCCGGC CGCGCCTTCC TCGAGTGGGG CTGGCGCGTG
CCGTTTTTCC TCAGTATCGT GCTGGTTGCG ATCGGGCTCT ATATCCGTCT GAATATTCTC
GAGACGCCGA TCTTCGCGAA GCTGCTGGCC GAGCGTCGGA TCGAGAAGAC TCCAATGCTC
GAAGTGCTGC GCAAGCAGCC GAGGGATATC GTGCTGTCGG CGTTTGCGCG GATGGCCGAG
CAGGCGCCGT TCTATATCTA TACGGCGTTC GTGTTCACTT ACGGAATCAC GGCGCTGGGC
GTCACGCGCG AACTGCTGCT GGCGGCGGTG CTGGTCGCAT CCGTCGTCGA GTTCTTCACC
ATTCCGCTGT TCGGGCACGT GTCGGATCTG ATCGGGCGGC GGAGGATGTA CATGATCGGT
GCGGCTACCG CCGGCGTATT CGGATTCGTC TACTTCGCAA TGGTCGATAG TCGGTATCCG
GTGTGGATCT TCACGGCTAT CGTATTGTCG CTGGTCCCGC ATTCGATGAT GTATGGACCT
CAGGCTGCAT TGATTGCCGA GTCGTTCACG GGGCGGTTGC GGTATAGCGG TGCGTCGATG
GGTTATCAGC TCGCTTCCGT CATTGCCGGT GGCCCGGCAC CGCTGATCGC AACGGCGCTG
TTTGCCTACT ACCACTCGGG GTATGCGATC GCGACGTACG TGCTGGTGTG TGCGGTGCTG
AGCGTGGTCG CCGCATCGAA GCTCGGGGAC TATACAAACA AGGATATTTC GCGAGAATAC
GACGACGCCG GGGGGGATCA TGGGCACGCG CCGCCGGTGA CTTGA
 
Protein sequence
MAAMQSAATP ISDEEARRQL HRAVIASTIG TTIEWYDFFL YSTVTGLVFA KLYFPQSHPL 
VGTLQAFLIY AVGFVARPVG AAIFGNYGDR IGRKATLIVT LLLMGFATFA VAFVPTYAAI
GIWGAVILTV LRFIQGVGVG GEWGGSVLMS MEWARTNTHR GFVASWPQFG VPAGLFLANL
AVLAMSWFSG RAFLEWGWRV PFFLSIVLVA IGLYIRLNIL ETPIFAKLLA ERRIEKTPML
EVLRKQPRDI VLSAFARMAE QAPFYIYTAF VFTYGITALG VTRELLLAAV LVASVVEFFT
IPLFGHVSDL IGRRRMYMIG AATAGVFGFV YFAMVDSRYP VWIFTAIVLS LVPHSMMYGP
QAALIAESFT GRLRYSGASM GYQLASVIAG GPAPLIATAL FAYYHSGYAI ATYVLVCAVL
SVVAASKLGD YTNKDISREY DDAGGDHGHA PPVT