Gene BamMC406_6188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_6188 
Symbol 
ID6182429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand- 
Start bp776877 
End bp777542 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content67% 
IMG OID641689316 
Producthypothetical protein 
Protein accessionYP_001816175 
Protein GI172065463 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.876994 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.335719 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAC AGCAGCTGTT GGCCTACTCG CCAGTGCCTA CGGCACCCCC GGGGCCATCG 
CAAGGAGAAT CGCCGGGCAT CGTGGATCTG CCGCGCCCGA TGCTCGATAA CGGCGTGCCG 
CTGATGGCGG CGCTCGCGAC CCGGATGAGT TCCCGCGAAT TCGCCGCCAC ACCGTTGTCG 
CCCGCGACGC TCGGCACGAT CCTGTGGGCG GCGGATGGCA TCAACCGGCC GGCAAGCGGC 
GGCCGTACCG CGCCGTCCGC GCACGCATTC AATGAAATCG ACATCTACGT TGCGCTGCCG 
TACGGTGTCT ATCGTTACGA TGCGCCCGCG CACCAGCTCG TGCTGAAGCA CGCGGTCGAT 
GCGCGCAATC TGACCGGCTA TCAGGACTTC GTCGGCCGCG CGCCGCTGGA TCTCGTCTAC 
GTCGTCCGGA CTGCAGCGAT ACTCGACATG CCGCCGCGAC AACGCGACGT GTTCTCGGCA 
ATCGCGGCCG GCGCCATCGC GCAGAACGTC TCGCTTTACT GCGCGGCGGC CGGCCTCGGC 
ACGGTCGTGC GCGGCTGGAT CAATCACCGC ATGCTCGCCG ACGCATTGCG ACTCAACGAG 
GACGAGTTGC CGATCCTCGC GCAGACGGTC GGCTATCGGA TCGGCAGTAC ACCGTCGCAT 
GCGTAG
 
Protein sequence
MTEQQLLAYS PVPTAPPGPS QGESPGIVDL PRPMLDNGVP LMAALATRMS SREFAATPLS 
PATLGTILWA ADGINRPASG GRTAPSAHAF NEIDIYVALP YGVYRYDAPA HQLVLKHAVD 
ARNLTGYQDF VGRAPLDLVY VVRTAAILDM PPRQRDVFSA IAAGAIAQNV SLYCAAAGLG 
TVVRGWINHR MLADALRLNE DELPILAQTV GYRIGSTPSH A