Gene BamMC406_6187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_6187 
Symbol 
ID6182428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp776338 
End bp776772 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content61% 
IMG OID641689315 
Productheat shock protein Hsp20 
Protein accessionYP_001816174 
Protein GI172065462 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.306682 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACA TGACGCGTTA CGATCCGTTT TCGCTCGAGC CAGTTTCCGA CCTGTTCCAG 
GGGCTGTTCA GGCCGCTGCG CGGCATGGCG TTGGCCGACG AACCCGATCT TGCGTCGATG
AAGATCGACG TCACCGAAAA CGACAAGGCG TATACGGTCA ATGCGGAACT GCCCGGCGTC
TCCAAGGACG ACATCGACGT CCAGATCACG GGAAATACCG TATCGATCAA CGCGAAGATC
GAGCGCAGCA ACGAGCAGAA GGATGGCGAG CGCGTGATCC GGCGCGAGCG CTACAGCGGT
GCGATCAGCC GCTCGTTCTC GCTGTCCGGC GACATCGACG ACGCGAACGC GACGGCGACG
TATCAGGATG GCGTGCTGTC GCTGACGTTG CCGAAGAAGG CGCTGATCGG GCAGAAGAAG
CTCACGATCA GCTGA
 
Protein sequence
MSNMTRYDPF SLEPVSDLFQ GLFRPLRGMA LADEPDLASM KIDVTENDKA YTVNAELPGV 
SKDDIDVQIT GNTVSINAKI ERSNEQKDGE RVIRRERYSG AISRSFSLSG DIDDANATAT
YQDGVLSLTL PKKALIGQKK LTIS