Gene BamMC406_6185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_6185 
Symbol 
ID6182426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp775376 
End bp775849 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content65% 
IMG OID641689313 
ProductUspA domain-containing protein 
Protein accessionYP_001816172 
Protein GI172065460 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.552133 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.212632 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACACGA ATATCATGGT CGCGACGGAC GGCAGTCCTT CCGCGAAACA GGCGCTCGAC 
GAAGGTCTCA GGATGGCCAG GCTATGCGGC GCCCGTCTGT TCGCCGTTTT CGTCGTCGAC
AAATCGACCC TGTTCGCTTA CGGCGGCCGC GTGGAGCCCG AGGCCTTGCT CGACGAGATC
CGGCGGCATG GCGCGGCAAT CCTGCGGGAT GCCGACCGGA CGATCTCGCG CGCGTCAGTC
AACGGCGAGA CGGAAATCAT CGAGACCGAT TTCGGGCAGG ATGTCGCTGA GCGACTTCAG
CAATACGTCG CCGACCATTC GACCGATCTG GCCGTGATCG GCACGCACGG TCGACGCGGT
GTCCGGCGGC TGGTGCTTGG CAGTGTCGCC GAACGCTTCC TCCGCACCTC GAGTTGCCCG
GTCTTGCTCG TGCGCGGCGA CGATGGCGCA CACACCACCG TCGCGGCGGC CTAG
 
Protein sequence
MYTNIMVATD GSPSAKQALD EGLRMARLCG ARLFAVFVVD KSTLFAYGGR VEPEALLDEI 
RRHGAAILRD ADRTISRASV NGETEIIETD FGQDVAERLQ QYVADHSTDL AVIGTHGRRG
VRRLVLGSVA ERFLRTSSCP VLLVRGDDGA HTTVAAA