Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_6185 |
Symbol | |
ID | 6182426 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | + |
Start bp | 775376 |
End bp | 775849 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641689313 |
Product | UspA domain-containing protein |
Protein accession | YP_001816172 |
Protein GI | 172065460 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.552133 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.212632 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACACGA ATATCATGGT CGCGACGGAC GGCAGTCCTT CCGCGAAACA GGCGCTCGAC GAAGGTCTCA GGATGGCCAG GCTATGCGGC GCCCGTCTGT TCGCCGTTTT CGTCGTCGAC AAATCGACCC TGTTCGCTTA CGGCGGCCGC GTGGAGCCCG AGGCCTTGCT CGACGAGATC CGGCGGCATG GCGCGGCAAT CCTGCGGGAT GCCGACCGGA CGATCTCGCG CGCGTCAGTC AACGGCGAGA CGGAAATCAT CGAGACCGAT TTCGGGCAGG ATGTCGCTGA GCGACTTCAG CAATACGTCG CCGACCATTC GACCGATCTG GCCGTGATCG GCACGCACGG TCGACGCGGT GTCCGGCGGC TGGTGCTTGG CAGTGTCGCC GAACGCTTCC TCCGCACCTC GAGTTGCCCG GTCTTGCTCG TGCGCGGCGA CGATGGCGCA CACACCACCG TCGCGGCGGC CTAG
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Protein sequence | MYTNIMVATD GSPSAKQALD EGLRMARLCG ARLFAVFVVD KSTLFAYGGR VEPEALLDEI RRHGAAILRD ADRTISRASV NGETEIIETD FGQDVAERLQ QYVADHSTDL AVIGTHGRRG VRRLVLGSVA ERFLRTSSCP VLLVRGDDGA HTTVAAA
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