Gene BamMC406_6158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_6158 
Symbol 
ID6182577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp741477 
End bp742364 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content56% 
IMG OID641689286 
Productpeptidase S15 
Protein accessionYP_001816145 
Protein GI172065433 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCGGC TTGAAGTGAC GTTCCCTTCT CACGGGGACG ATTGTGTAGC TTGGCTATAC 
CTTCCGGACA CCAGCAGGCC GGCACCCGTG ATCGTGATGG CACATGGTCT GGGCGGCACG
CGTGAAATGC GACTGGATGC GTTTGCTCAC AGATTCTGCG AGGCTGGATT TGCCGGTCTG
GTGTTTGATT ATCGGCACTT CGGCAGCAGT GACGGCGAGC CGCGGCAATT GCTCGATGTA
GGCAAGCAGC TACAAGACTG GAGGGCTGCA ATAGCATTTA CTCGGACACG AAACGACATA
GACGCAGAGA GATTGATTGT CTGGGGATCG TCGTTTGGGG GAGGGCATGC GCTGACCATC
GCGGCCGACA ACGCTCAAGT GTCCGCGGTC ATTGCCCAGT GTCCGTTCAC GGATGGGCTA
GCTTCTGTTT GCGCTTTACC ATTAGGAACA CTAATCAAGG TCACTGCCAG AGCGATCCGC
GATCAATTCC GCGCATGGTT GGGAGGGCAC CCGTTGACCA TCCCGATAGC CGGGAAGCCT
GGGGAGGCCG CATTAATGGT GGCGCCTGAT GCCGAGCCCG GCTACCTGAA GTTGGTTCCG
AACGATATGT CAGCGGTCTT TCGTAACTAC GTGGCAGCCC GATTCGCCCT TCAAATCATT
CGCTATTTTC CCGGTCGCAA GACTTCACGG ATCGCCTGCC CGGTGCTGTT CTGCGTTTGC
GATCCTGATA CCGTCGCGCC GACGCGTGCG ACGTTGCGTC ACGCAAAACG TGCACCCAAA
GGATTGGTCA ATATATATCC GTTCGGACAT TTCGACATTT ATGTGGGTTA TGCCTTTGAG
CGGGCAGTCA GCGATCAAAT CACCTTCCTT CAAAGATTCA TTGATTAA
 
Protein sequence
MRRLEVTFPS HGDDCVAWLY LPDTSRPAPV IVMAHGLGGT REMRLDAFAH RFCEAGFAGL 
VFDYRHFGSS DGEPRQLLDV GKQLQDWRAA IAFTRTRNDI DAERLIVWGS SFGGGHALTI
AADNAQVSAV IAQCPFTDGL ASVCALPLGT LIKVTARAIR DQFRAWLGGH PLTIPIAGKP
GEAALMVAPD AEPGYLKLVP NDMSAVFRNY VAARFALQII RYFPGRKTSR IACPVLFCVC
DPDTVAPTRA TLRHAKRAPK GLVNIYPFGH FDIYVGYAFE RAVSDQITFL QRFID