| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6116 |
|---|
| Symbol | |
|---|
| ID | 6182318 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010557 |
|---|
| Strand | + |
|---|
| Start bp | 695963 |
|---|
| End bp | 697195 |
|---|
| Gene Length | 1233 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641689244 |
|---|
| Product | MarR family transcriptional regulator |
|---|
| Protein accession | YP_001816103 |
|---|
| Protein GI | 172065391 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGAGC GGTCGATTGC TCGTGCCAAA TTTTTTCTTT CAGATAGGGA AAGATTATCG
CGTTTGTGTA GCGTCACGAT CATCTCAACA ATAGCTCCCG GGAGACCTCG AAGCGAGGAA
ACGTGTCGCA GACGGATCCC GCCTCTACCC CTTGTGGGGG CACAGGTCGC TCCTCCGTGC
GGAGCCGTTC AAGAGATTGA CATCATGAAA AATTTCGCGT CGCTTACGCA AATGACGATC
TTCGTGCGTA TCGCGGAGCT TGGAAGCCTC TCGGCCGCGG CGCGCGACCT GAACCTTTCG
CCGTCGGCAG TAAGCAAGAG CCTCGCACAA TTGGAAGACA GGCTCGGCAC ACTACTCATC
AAACGGACGA CACGCAGTTT GACGTTGACC GATGCAGGCC GCGCAATCTT CGCGCGCGCC
GGCGCGATAC TGACGGATAT CGAGACCACA TTGGATGTTG CGAGGGAGGG GCAACTGCCA
GAGGGCATTC TCCGTCTGAC TTGTTCTCTT GCATTCGGAT GCAAGCAACT TACCCCTGTT
TTGGGGCGAT ACCTGGGGGC GCATCCCGAC GTTGCAGCGA CGATCGCGCT TGACGACAGA
TTGGCAAATT TGGCGGAAGA AAACTACGAC ATCGCGGTCC GCATCACAGC GAATACGGAT
TCAGGATATG CCGCCCGCAA GCTGGCAACG ATCCATTGGG TATATTGCGC GTCGCCCCGC
TACGTGGAAA ACCATGCAGA AATATGTGCG CCTGATGATT TGATGAACCA CACGTGTCTT
GTGTATCCTG CGATGACGGT GAACGGAGCA TGGACGTTCC GCCAACACGA TCAAATTCGA
CATATCCAGG TAGACGCGAG GCTGACGTCA AATTCCAGCC TCGCGTTGCG GGAAGCGGCA
ATTGATGGAT TAGGCGTGGC TTGCCTGCCG ACCTATCTCG TCTCCGCGGA CATTATTCGC
GGCGATCTGA AGCTGGTGGT TCCGCAGTAC AAGGCCGCTA TCTCGCATAC GCTTTATGCG
ATGTATTACC GCTCGAAATA CGCGAATGCG TTGATTCGCA GCTTCATCGA TTTCGTTGTG
GCCGACATTG GCGAAGTTGC CCCATGGGAC AGAGCAATGC GGGACGAACT AGGCCTGTCA
ATTTTCGAGG ATAGATCGGC GCGGGGTATG GGCGGCGAAC GGCATCGATC ATCGCCCGAA
CTGCCTCGAC GCGATATCGA GATCTCGGAG TAG
|
|---|
| Protein sequence | MSERSIARAK FFLSDRERLS RLCSVTIIST IAPGRPRSEE TCRRRIPPLP LVGAQVAPPC
GAVQEIDIMK NFASLTQMTI FVRIAELGSL SAAARDLNLS PSAVSKSLAQ LEDRLGTLLI
KRTTRSLTLT DAGRAIFARA GAILTDIETT LDVAREGQLP EGILRLTCSL AFGCKQLTPV
LGRYLGAHPD VAATIALDDR LANLAEENYD IAVRITANTD SGYAARKLAT IHWVYCASPR
YVENHAEICA PDDLMNHTCL VYPAMTVNGA WTFRQHDQIR HIQVDARLTS NSSLALREAA
IDGLGVACLP TYLVSADIIR GDLKLVVPQY KAAISHTLYA MYYRSKYANA LIRSFIDFVV
ADIGEVAPWD RAMRDELGLS IFEDRSARGM GGERHRSSPE LPRRDIEISE
|
|---|
| |