| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5993 |
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| Symbol | |
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| ID | 6181945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 546992 |
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| End bp | 547531 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641689123 |
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| Product | peptidase A24A prepilin type IV |
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| Protein accession | YP_001815982 |
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| Protein GI | 172065270 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4960] Flp pilus assembly protein, protease CpaA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.363598 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCCTG CCGCGCTGCC TTACCCGATT CCATTGTGCG TGACGCTGCT CGCGATCGTC
GCGGCCAGCA CCGACATCAC GAGCCGACGC ATTCCGAACC GGCTCGTCGC GCTCGGTCTG
GTCGGCGCGC TGATCGCACA GTGCGCGCTG CACGGGATCC AGGCAGGTGC GCTTGCGTGG
CTGGCGGGCG CGGCGACCGG CTTCGGGCTG CTGCTGCCGT TCTATCTGCT GCGCGGAATG
GCTGCGGGCG ACGTGAAGCT GATGCTCGCG ATCGGCGCAT GGGTCGGCGC GCAGATGACG
TTCTACATCG TGCTGGCCAC CTTTCTGGTC GGCGGGATCG GCGCGATCGG CTTTGCGCTG
CTGCGCGGAC GCATGCGCCA GATGTGCGCG AACGTCTGGA CGCTGATCGC GCGCCGCTCG
ACCGGCGCGT ATGCAGGGGC AACCGACGGC CCCGTGGAAT TCGCGTCGGT TGGCGCGTTG
CCGTATGGCG TGGCGATTGC CGCCGGCACG CTGGGCATGC TGTTCGTTTC GTCTGTATAG
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| Protein sequence | MLPAALPYPI PLCVTLLAIV AASTDITSRR IPNRLVALGL VGALIAQCAL HGIQAGALAW
LAGAATGFGL LLPFYLLRGM AAGDVKLMLA IGAWVGAQMT FYIVLATFLV GGIGAIGFAL
LRGRMRQMCA NVWTLIARRS TGAYAGATDG PVEFASVGAL PYGVAIAAGT LGMLFVSSV
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