| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5960 |
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| Symbol | |
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| ID | 6182252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 509744 |
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| End bp | 510550 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641689090 |
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| Product | DeoR family transcriptional regulator |
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| Protein accession | YP_001815949 |
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| Protein GI | 172065237 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTGA CCAGGCGCCG GGAGGCAATG CTGCAGGCCG TACTCGGGGG CATGACGGAC
GTTGCGACGT TGTGCGAGCA CTTCGGGATG TCGGAAGCAA CCGTTCGCCG GGATCTGCGT
GCGCTCGCGA GCGACCGTCG CATTCTGCGC ACCTACGGCG GTGCCGCCGC GGTGGGCGGC
CATGAGCCGG AGCCCTCGCT CGAGGAGCGG CGCGTCAGTT CGCAGGAACA GAAGGAAGCG
ATCGCGCACA CGGCAAGCGC GTTCGTCGAG GACGGCGACA CCGTATTCCT CGACGGCGGC
ACCACGACCG CGGCGCTGGC GCGCCTGCTT GCCGGCCGGA CAGCCGTTCA CGTCGTCACC
AACAATCTGC TGGTCGTCAG CCCGCTCGCC GCGTCGGGCG TGCGGGTGAC GGTGATCGGC
GGCGACGTCC GGTCGTCCAG CATGAGCACG CTCGGGCCGC TCGCACAGAT CGCGCTGAGC
CGCCTGAGCG TCGACAAGGC GTTCCTCGGC GCGGATGGCG TGGTCGCCGA ACTCGGCTTG
TGCGAGGCGA GCAGCGAACA GTCGTATCTG AAGGAATGCG TGATGCGGCA GGCAGCCGAG
GTCTTCGTGC TCGTGACCGC GGACAAGCTC GGACGCGCGA GTCAGCAGCA CTGGACGCCG
CTCGAGCGTG ACTGGACGCT CGTGACGGAT GATGCGGCCC TGCCCGAGCA GCTCGAGCGG
TTTCATTCGC AAGCGCGGAT CACCGTTCAC GCGGTCAGCA CGAAGACTGC GGCGCCATCC
GGCGGTTCAT CGCAGGTTCA AACGTAG
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| Protein sequence | MKVTRRREAM LQAVLGGMTD VATLCEHFGM SEATVRRDLR ALASDRRILR TYGGAAAVGG
HEPEPSLEER RVSSQEQKEA IAHTASAFVE DGDTVFLDGG TTTAALARLL AGRTAVHVVT
NNLLVVSPLA ASGVRVTVIG GDVRSSSMST LGPLAQIALS RLSVDKAFLG ADGVVAELGL
CEASSEQSYL KECVMRQAAE VFVLVTADKL GRASQQHWTP LERDWTLVTD DAALPEQLER
FHSQARITVH AVSTKTAAPS GGSSQVQT
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