| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5953 |
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| Symbol | |
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| ID | 6182245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 502717 |
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| End bp | 503664 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641689083 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001815942 |
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| Protein GI | 172065230 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.884955 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCGAA TCGGATTCTT CGTTTGCCGT GGCTACGATG CGCTTGATCT GGGCGGCCCA
CTGGCGGCCT TCAATCAGGT GGCCACGGCC GCGGGCCATA CGCCGTACGA TCTTCATGTC
ATCTCGCAAT CCGGCGGCCC GGTGCACGGC AATACGGGCC TGTCGATCGA CACGAAGCCC
GCCGCAAGGC GCACGTTCGA CACCGTCGTG TTCGTGGGCG GCACTATCGA TCCGATGCAG
ACGCCGGAGA ATATCGCCGC CGCCAGAAAA TTGGCCGCCA GGGCATCGCG GGTCGCGAGC
GTCTGTACGG GCGCGTTTCT GCTCGCGGAA ACGGGCTTGC TGGATGGCTT GAGAGCCGCG
ACGCACTGGC GATACGCGGC GCTATTGCAG GCGCGCTTTC CTCGCACCCG GGTCGACGGT
GACAGCATCT ACGTGGTGGA CGGGCGCGTG TGGACGTCGG CGGGCATCGC GTCCGGAATA
GACCTGGCGC TCGGCATGAT TGAACGAGAC ATGAGTGCGG AGACCGCGCG CGCTGTCTCG
AGGCTGTTGG TCGTTCCGTA TCGTCGACCG GGAGGGCAGT CGCAATTCTC CGCCATGTCG
CAGATGGAGC CGGAATCGGA TCGCATCCGC ATCGCGCTGA ATTTTGCCAG GGAGCATCTG
GCTGAAGCGT TGCCTGTCGA ACGGCTTGCC GATGCCGCGA GATTGAGTGT GCGACAGTTC
GGCCGCGCCT TTCGCCGGGA AACCGGAGAA ACACCGGCCA AGGCCGTCGA GCGTTTGCGC
GTCGAAGCCG CGAGGCTGCG CCTGCAGAGT GGCAGCGAAC CGATCGAACA GATCGCGTTT
GCGGTGGGAT TCACCGATCC GGAGCGGATG CGACGGGCCT TCATCAAGCT GCACGGGCAT
CCACCGCAAG CGATTCGACG CGAGAGCAGA TCGAACGGCG CGCGCTGA
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| Protein sequence | MHRIGFFVCR GYDALDLGGP LAAFNQVATA AGHTPYDLHV ISQSGGPVHG NTGLSIDTKP
AARRTFDTVV FVGGTIDPMQ TPENIAAARK LAARASRVAS VCTGAFLLAE TGLLDGLRAA
THWRYAALLQ ARFPRTRVDG DSIYVVDGRV WTSAGIASGI DLALGMIERD MSAETARAVS
RLLVVPYRRP GGQSQFSAMS QMEPESDRIR IALNFAREHL AEALPVERLA DAARLSVRQF
GRAFRRETGE TPAKAVERLR VEAARLRLQS GSEPIEQIAF AVGFTDPERM RRAFIKLHGH
PPQAIRRESR SNGAR
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