| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5890 |
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| Symbol | |
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| ID | 6182473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 425323 |
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| End bp | 426390 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641689021 |
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| Product | porin |
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| Protein accession | YP_001815880 |
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| Protein GI | 172065168 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAACA GAATCGTGAT CGGTTGCGCC GCGCTGGCGG GCGCAATGGC CAGCACCGGC
GCCTTCGCGC AAAGCAGCGT GACGCTGTAC GGCAACCTCG ACGCCGCATT GCTGTACACG
AGCAAGACGC TCGATGCCGC CACCGGCGCG AACGCAGGCC ATCAGTTCGC GATGACCGAC
ACCGGCATGA CGCCGACGAC CTTCGGGATG ACCGGCACCG AGGATCTCGG CGGCGGCCTC
AAGGCGAAAT TCCAGCTCGA AAGCGGCTTT GCCGTCACCA ACGGCGAGTT CGCCCATTCG
AACGGCAACT TCTTCGGTCG CCAGGCGTGG GTCGGGCTCG ACGGCGGCTT CGGCACGCTC
AAGGCTGGCG TGCAGTACTC GCCGTTCCTG CTCGCGATCT TCGATTCGGA TCCGCGCAGC
TTCTCGCACT TCGGCAGCGG GCTGATCAAC TACGTCGACA ACGTGCTCGT GACGGGCCTG
TTCAACCCGA ACGCCGTGTC GTATACGAGC CCGACGATCG CCGGCCTCAC CGGCAGCGCG
ATGTTCGCGT TCGGCGGCAA GGCCCGCGAC TTCCAGGCCG GACGCCAGTA TTCGGCGAGC
GTCAAATACG AGCACGACGG CTTCATGATC AACGCCGCGT TCTACGACGG CAACGACGGC
ACCAACCCGA CGCCGACGCC GAGCACCGTC GCGTTCGTCG GACGCACGAT CGGCGCCGCG
TACCGGTTCG GCCCGGTCAC CGCGAAGGCG TCGTTCGCGA GCTACAAGGT CGGCGGATCG
TTCAGCAACA ACGTGTACGG CGGCGGCCTC GACTACCAGG CGACGCCGGC CGTCGACCTG
AACGGCGGCG TCTGGTTCAC CAGCGATCGC AACGACACGG CCAATCACTC GCTGCTCGCG
GCCGTTGGCA CGACCTACAG CCTGTCGAAG GCCACCGCGC TGTACGCGCA GGTCGCGATG
GTCAACAACC ACGGCGCGAT GAATACCGGG CTCGGGATCA ACAACGCGCT TTACGCGGTC
ACCGGGACGA CCGTCGGCGC GAACCTCGGG ATTCGTCACC TGTTCTGA
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| Protein sequence | MKNRIVIGCA ALAGAMASTG AFAQSSVTLY GNLDAALLYT SKTLDAATGA NAGHQFAMTD
TGMTPTTFGM TGTEDLGGGL KAKFQLESGF AVTNGEFAHS NGNFFGRQAW VGLDGGFGTL
KAGVQYSPFL LAIFDSDPRS FSHFGSGLIN YVDNVLVTGL FNPNAVSYTS PTIAGLTGSA
MFAFGGKARD FQAGRQYSAS VKYEHDGFMI NAAFYDGNDG TNPTPTPSTV AFVGRTIGAA
YRFGPVTAKA SFASYKVGGS FSNNVYGGGL DYQATPAVDL NGGVWFTSDR NDTANHSLLA
AVGTTYSLSK ATALYAQVAM VNNHGAMNTG LGINNALYAV TGTTVGANLG IRHLF
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