Gene BamMC406_5866 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5866 
Symbol 
ID6182765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand+ 
Start bp397978 
End bp398688 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content73% 
IMG OID641688998 
ProductTetR family transcriptional regulator 
Protein accessionYP_001815857 
Protein GI172065145 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC GCCTCGAACC CGCCTCGCGC GATACCGCCG CGCCTGTCGA CACGGCCGGA 
CGCGCCGACG CACGGCGCAC GCCCGAGCCC ACGCCCGCTG CCGGCGTGCG GCGGAAAAAG 
GCCCCCGAGC AGGTGCGCGC GCAGCTGCTG GAAGCTGCGT CGGACATCGC GACCGGTCAG 
GGCGTGGCCG CGCTGACGCT CGACGCGGTC GCCGAGCGCG CGGGCGTGAC CAAAGGCGCG 
CTGCAGTATC ACTTCGCGAA CAAGCAGGGC CTGCTCGATG CGCTGTTCGG GCAGGCGACC 
GAACGCTTCG CGACGCAGAT GGCCGCGCGT CGGGCGGCCG ATTCGCACGG CGACGGCGCG 
GCGGCGCGTG CGTATCTGCA TGCGGTGCTC GACACCGCGC AGCCGGCCGC GAGCACCGAC 
GTGCTGCGCG TGCTGGTCGC GTCGATGATC ACCGAGCAGG AGACGCGTGC GCGCTGGTCG 
GTGCCGATGC GCGAGTGGAC GCGGCCGGAC CCGGTGCCGC TCGAGCGCGC GGCGACGCTG 
ATGATCTGCC GGCTGGCGGC CGACGGGCTG TGGATCTCGG AGTTGCTCGA CAGCGTGGAG 
ATTTCGGCCG AGCTGCGCGC GGAGATCGTC CGGCAGCTGG ACCGGATGAG CGCAGGCGAG 
CCGCCGGCGG GCACGGGCAA GCGTACGAGC GTGCGCGGCC GACGCGGCTG A
 
Protein sequence
MKKRLEPASR DTAAPVDTAG RADARRTPEP TPAAGVRRKK APEQVRAQLL EAASDIATGQ 
GVAALTLDAV AERAGVTKGA LQYHFANKQG LLDALFGQAT ERFATQMAAR RAADSHGDGA 
AARAYLHAVL DTAQPAASTD VLRVLVASMI TEQETRARWS VPMREWTRPD PVPLERAATL 
MICRLAADGL WISELLDSVE ISAELRAEIV RQLDRMSAGE PPAGTGKRTS VRGRRG