Gene BamMC406_5846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5846 
Symbol 
ID6182656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp377645 
End bp378148 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content61% 
IMG OID641688981 
Producthypothetical protein 
Protein accessionYP_001815840 
Protein GI172065128 
COG category[S] Function unknown 
COG ID[COG5642] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02293] putative toxin-antitoxin system antitoxin component, TIGR02293 family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.157399 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCCT CCTCCTCTAT TAGTCGCCAT CCTATCGGGC ATCCCGGCGG GCGGCGCGCG 
GCAAAGCACG CCGCAACTCC AGCACGCTTC GGTGCGAACC AAGGCGATTT CGCTGCTTTC
CTGCATATGG CACCGATGTC ACAGCGGCGC ATAATTGCCG ATGGCTTCGA CGCGACGATC
GTCGAACGCG TTGCGCGTGA CCTGCTCGGG GTGTCCGTCC AATCACTGTT GACTTCATTG
AGCCTGCCGA GCTCGACGAT CCTGCGGAAA ATTGCGAAAG AGGATCGCCT CTCGCAAAGC
GAGTCCGATC GGCTCGCGCG CGTCCTCTAT GTACACCAGC TCGCGACAGA AGTGTTCGAG
GACGACACCC GTGCAGCAGA ATGGATGAAT CGTGGGAACG TCGAACTCGA CGGTCATAAG
CCGATCGAGG TTCTCGACGT GCAGCCTGGC TACGATCGCG TGCGCGATAT CCTGAACCGA
GCGCAGTTCG GGGTCGCCGC GTGA
 
Protein sequence
MAASSSISRH PIGHPGGRRA AKHAATPARF GANQGDFAAF LHMAPMSQRR IIADGFDATI 
VERVARDLLG VSVQSLLTSL SLPSSTILRK IAKEDRLSQS ESDRLARVLY VHQLATEVFE
DDTRAAEWMN RGNVELDGHK PIEVLDVQPG YDRVRDILNR AQFGVAA