Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5846 |
Symbol | |
ID | 6182656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | + |
Start bp | 377645 |
End bp | 378148 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641688981 |
Product | hypothetical protein |
Protein accession | YP_001815840 |
Protein GI | 172065128 |
COG category | [S] Function unknown |
COG ID | [COG5642] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR02293] putative toxin-antitoxin system antitoxin component, TIGR02293 family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.157399 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGCCT CCTCCTCTAT TAGTCGCCAT CCTATCGGGC ATCCCGGCGG GCGGCGCGCG GCAAAGCACG CCGCAACTCC AGCACGCTTC GGTGCGAACC AAGGCGATTT CGCTGCTTTC CTGCATATGG CACCGATGTC ACAGCGGCGC ATAATTGCCG ATGGCTTCGA CGCGACGATC GTCGAACGCG TTGCGCGTGA CCTGCTCGGG GTGTCCGTCC AATCACTGTT GACTTCATTG AGCCTGCCGA GCTCGACGAT CCTGCGGAAA ATTGCGAAAG AGGATCGCCT CTCGCAAAGC GAGTCCGATC GGCTCGCGCG CGTCCTCTAT GTACACCAGC TCGCGACAGA AGTGTTCGAG GACGACACCC GTGCAGCAGA ATGGATGAAT CGTGGGAACG TCGAACTCGA CGGTCATAAG CCGATCGAGG TTCTCGACGT GCAGCCTGGC TACGATCGCG TGCGCGATAT CCTGAACCGA GCGCAGTTCG GGGTCGCCGC GTGA
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Protein sequence | MAASSSISRH PIGHPGGRRA AKHAATPARF GANQGDFAAF LHMAPMSQRR IIADGFDATI VERVARDLLG VSVQSLLTSL SLPSSTILRK IAKEDRLSQS ESDRLARVLY VHQLATEVFE DDTRAAEWMN RGNVELDGHK PIEVLDVQPG YDRVRDILNR AQFGVAA
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