Gene BamMC406_5765 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5765 
Symbol 
ID6181882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp291902 
End bp292963 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content68% 
IMG OID641688901 
Producthypothetical protein 
Protein accessionYP_001815760 
Protein GI172065048 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.125359 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.809167 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCGA GACACTCCGC GATTCTCGTC GCACTCATCG CCGCCGCGCT GTTCGGCGCC 
GCGACGCCGC TCGCCAAGGC ACTGCTCGGC GCGATGTCGC CGTTCATGGT CGCTGGCCTG
TTCTATCTCG GTAGCGGGAT CGGTCTCGCC ATCGGGATCC TGCTTCGCGG ATTGCGCAGC
CGCCGCGCGC CGGCCGGTAA TGCCGCGCCG CTGCAACGCG CGGACCTGCC GTGGCTTGCC
GGCGCGATCG CGGCCGGCGG CGTCGCGGGC CCGGCGCTGC TAATGCTCGG GTTGGCGAGC
ACGCCGGCCG CGACGAGTGC GCTGCTGCTC AATCTCGAAG GTGTACTGAC GGCCGTCATC
GCGTGGGTCG TGTTTCGCGA GAACGTGGAT CTCCAGGTGT TTCTCGGCAT GGTCGCAATC
GTCGCCGGCG GCACGCTGCT GTCCTGGGTG CCGGGGCGCG CGGGCGTGCC GGTCGGTGCG
CTGCTGATCG CCGCCGCCTG CCTGTGCTGG GCGATCGACA ACAACCTGAC CCGCAAGGTC
GCCGCGAACG ATGCAATGGT CATCGCGTGC GTGAAAGGCC TGGTCGCCGG GCCCGTGAAT
ATCGGCATCG CGCTCGCGGC CGGCGCGGCG CTGCCCGCCG TTCCGGCCAC GGCCGCCGCG
ATGCTGACCG GGCTCGGCGG CTACGGGATC AGTCTCGTGT TGTTCGTCGT CGCGCTGCGT
CATCTCGGCA GTGCGCGCAC GGGCGCGTAT TTTTCCGTGG CGCCGCTGTT CGGCGTCGTG
CTGTCGCTGC TGATCTGGCC GGCACTCCCG TCCGTCACGT TCTGGATCGC GGCCGCGTTG
ATGGCGCTCG GCATCTGGCT GCATGTGCGC GAACGGCACG AACACGAACA TGCGCACGAG
CGGCTCGAGC ATACGCACCG GCATCGGCAT GACGAACATC ATCAGCACAC GCACGACTTT
CCGTACGATG GCGATGAACC GCATACGCAT CCGCACGCGC ATCTGCCGAT CACGCACAGT
CACGCGCATT TCCCGGACAT TCACCATCGC CATCGACACT GA
 
Protein sequence
MNPRHSAILV ALIAAALFGA ATPLAKALLG AMSPFMVAGL FYLGSGIGLA IGILLRGLRS 
RRAPAGNAAP LQRADLPWLA GAIAAGGVAG PALLMLGLAS TPAATSALLL NLEGVLTAVI
AWVVFRENVD LQVFLGMVAI VAGGTLLSWV PGRAGVPVGA LLIAAACLCW AIDNNLTRKV
AANDAMVIAC VKGLVAGPVN IGIALAAGAA LPAVPATAAA MLTGLGGYGI SLVLFVVALR
HLGSARTGAY FSVAPLFGVV LSLLIWPALP SVTFWIAAAL MALGIWLHVR ERHEHEHAHE
RLEHTHRHRH DEHHQHTHDF PYDGDEPHTH PHAHLPITHS HAHFPDIHHR HRH