| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5689 |
|---|
| Symbol | |
|---|
| ID | 6182099 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010557 |
|---|
| Strand | - |
|---|
| Start bp | 201824 |
|---|
| End bp | 202666 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641688821 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_001815685 |
|---|
| Protein GI | 172064973 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.0414771 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTATCGA GATTTCTGAG CCTTGAGCTT GGGCAGGTGC ATTACCTGAG CAACGATCGA
AGCGACCTTC CCGCACTGCT GCTGCTGCAT GGCAATGCGT CGTCGGCTGC ATCGTTCGAC
GATCTGGCGA ACGCGCTGGA CGGCCGGTTC CATTTGATTG CGCTGGATTT CCCCGGGCAT
GGCCGGTCGG ACCGCTTGTC CATGCCCGCT GATGCATATG CATACAGCAT GGAAGGCCTG
CGCGATCTGC TAGTCAAGGC CATCGCGTGT CTCGGGCTTT CCGACTATTC GATCGCGGCG
AACAGCCTCG GCGCCAATAT CGCGGCACAG GCGTTGCCGT CGCTGCACGG ATTGCGGGCG
CTGATTCTGA TGGCGAGCAT CCACTCGTCG GGGAAGGACG ATTTCTTCTC GAACGTGAAG
CCCGACGCGC CGAGCAAGAC GTCGCTCAAG CCTGTATTCG ACGAGGCGGA CATCGATGTG
CTGACGCGCG CGTTCATTCA TCCGTCCAGA GCCGGCAAGC CGTACGCGCG GATGGCACGC
GACCTGCGCG AATCGGACGG CAACTTCCGT GAGCAGATCG TCCGCTTCAT GGCGCTCCAG
CATTGGCCCG ACGAAATCGC GCTGCTGGCA CGCAGCACGG TTCCGCTTCT GTACATCGGC
GGGCGCGACG ACGCCTTCAT TCAGCACGCG TTCTACCGGA AGCTCGCGCA GCAGGTTCCG
CAGCTCGATG GGCGCCTGCT GTTGCTCGAC AACGTCAGCC ACGTTCCGCA TCTGGAGGAT
GCGTCCGCGT GCGCACGATC GATCGTCGAA TTTGCCGAAT CGCTGCGCTC GGAGGCGTCA
TGA
|
|---|
| Protein sequence | MLSRFLSLEL GQVHYLSNDR SDLPALLLLH GNASSAASFD DLANALDGRF HLIALDFPGH
GRSDRLSMPA DAYAYSMEGL RDLLVKAIAC LGLSDYSIAA NSLGANIAAQ ALPSLHGLRA
LILMASIHSS GKDDFFSNVK PDAPSKTSLK PVFDEADIDV LTRAFIHPSR AGKPYARMAR
DLRESDGNFR EQIVRFMALQ HWPDEIALLA RSTVPLLYIG GRDDAFIQHA FYRKLAQQVP
QLDGRLLLLD NVSHVPHLED ASACARSIVE FAESLRSEAS
|
|---|
| |