| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5616 |
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| Symbol | |
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| ID | 6182699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 116773 |
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| End bp | 117822 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641688748 |
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| Product | patatin |
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| Protein accession | YP_001815612 |
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| Protein GI | 172064900 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.196838 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.302344 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAATCA CGCATACAAG ACGTCACCGC GATGTCCCGC GCAAACCGGT CGCGCTGGCG
TTGCAGGGCG GCGGGATGCA CGGCGCCTTC ACGTGGGGCG TGCTCGACCG GCTGATCGAA
GACGGCAGGC TCGACATCGA GGGCGTCAGC GCCACCAGCG CCGGCGCGAT GAACGCCACG
GTACTCGCGT ACGGGCTGCT GCAGGGCGGC GAGGACGGTG CGCGTCAGGC GCTGCACGAT
TTCTGGGAGG CGGTCGCGAA ATCGGCGGAG CACTACAACC CGCTGCGCTG GGCGCCGTGG
TTGAAGGGCA CGCACAGCTT CGGGCTCGAT CATTCGCCGA TTTATGCGTT CGCCGACATG
ATGCTGCGCA TTTTCTCGCC CTATCAGTTC AATCCGAACA ACCTGAATCC GCTGCGCGAG
GTGCTCGAGC GCCGGGTCGA CTTCGACGCG CTGCGCAAGC ACTGTCCGAT CCGCTTGTAC
CTGTGCGCCA CCAACGTCGA GACCGGGAAG ATACGCATCT TCACGGGCGA GGATGTCAGT
GCCGACGCGG TGCTTGCATC GGCATGCGTG CCGACCCTGT TCCAGGCGGT GTCGATCGAT
GGCGAGTACT ACTGGGACGG CGGCTACATG GGCAATCCGG CCATCTATCC GCTGATCTAC
AACTGCGCGA CGCGCGACGT CGTGATCGTG CACATCAATC CGCTCGTGCG CCGTGGTGTC
CCCGTCACGG CCGCGGAAAT TCTCAACCGT ATCAGCGAGA TCAGTTTCAA CTCGTCGCTG
ATGCGCGAGA TGCGCGCCAT CGCGTTCGTC ACCGACCTGA TCCGGGACGG CACGGTCAAG
CGCGGCGACA TGAAGGAAAT GCTGATCCAT TCGATTCGCG CGGACGACGC GCTGAGCGCA
TTGAGCGTAT CGAGCAAGTA CAACGCGGAT TGGGGATTTC TGAGCGAATT GCGTGACCAC
GGGCGGCGCG AAGCGGACGC ATGGCTCGCG CATCATTACG GAAACATCGG GCAGCGGTCG
AGCATCGACA TTCGCAGGGA ATTTTTCTGA
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| Protein sequence | MTITHTRRHR DVPRKPVALA LQGGGMHGAF TWGVLDRLIE DGRLDIEGVS ATSAGAMNAT
VLAYGLLQGG EDGARQALHD FWEAVAKSAE HYNPLRWAPW LKGTHSFGLD HSPIYAFADM
MLRIFSPYQF NPNNLNPLRE VLERRVDFDA LRKHCPIRLY LCATNVETGK IRIFTGEDVS
ADAVLASACV PTLFQAVSID GEYYWDGGYM GNPAIYPLIY NCATRDVVIV HINPLVRRGV
PVTAAEILNR ISEISFNSSL MREMRAIAFV TDLIRDGTVK RGDMKEMLIH SIRADDALSA
LSVSSKYNAD WGFLSELRDH GRREADAWLA HHYGNIGQRS SIDIRREFF
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