| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5540 |
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| Symbol | |
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| ID | 6182339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 34517 |
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| End bp | 35458 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641688672 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001815536 |
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| Protein GI | 172064824 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.108539 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGACA ACGTCACCAT CAATCAACTT CGAGCGTTCG TCGCCGTGTG TGACCAGGGC
AGCTTTTCCG GGGCGGCAAG GGAACTGAGG CGGGCGCAGT CGGCGATCAG TCACGCGATC
AATGCGCTCG AGAATGCCTT CGACGTGATG CTGTTCGAGC GAAACACGCG CAAGGCGACG
CTCACGGCAG CAGGCCGCAG CCTCCTGCCC GATGCGCGCG GGGTGATTGC GCGCACCGAG
GAAATGAAGA TGCGCGCGGT TGCGATCGCT GAAGCCGGTG TTCCGCAGGT CTCGATCGCC
GTGGATACCT ATTTTCCACG TGCGCACCTG ATTGAATGCC TGCGCACGCT GCAGGCGGAC
TATCCGACGG TCGCGATCAA TCTGCGCATG ACGACCATGC AGGGCGGCGA GCGCCTGGTT
CTCGACGGCA CGTGCGCCTT GGCGGTAACG ATCACGGATG TGCCCGAGCT GAGCCAAGAC
TCCATCGAGC GGCACCATTT ATGTGACGCG CAAATGGTGA CCGTCTGTGC GCCATCGCAT
CCGCTCGCGG CAATCAAGGG GCCGATTCCA CGGGAGGAAT TTGGCCGGCA CATCCAGCTC
GTCGTGACGG ACAATCAGCC CGATGCGGAA AAGACCCAAC AGGGGGTCGC CGGTGAACGC
CAGTGGTGGG TGAATGATCT CGGCGCGAAG CACGATCTGC TCAGGGGAGG CTTGTGCTGG
GGGCACATGC CGCGCCATCT GGTCGAGCAA GACCTCGCGA AGGGATTACT TGTCGAACTC
CAACGGCGCG CGTGGCACAT GCGCGCCCTC ACGTTCATGA TCTCCCAGCG GCGCGGATAC
TCGTTTTCCG AATGCGAGAC CCAGCTGGTC GAGCTCCTTG GCCATCGTCA TCTCGTCCTA
AAGGGCGGCA AAGCCAAGGT CAGTGTGACG CGCGGTCGCT GA
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| Protein sequence | MLDNVTINQL RAFVAVCDQG SFSGAARELR RAQSAISHAI NALENAFDVM LFERNTRKAT
LTAAGRSLLP DARGVIARTE EMKMRAVAIA EAGVPQVSIA VDTYFPRAHL IECLRTLQAD
YPTVAINLRM TTMQGGERLV LDGTCALAVT ITDVPELSQD SIERHHLCDA QMVTVCAPSH
PLAAIKGPIP REEFGRHIQL VVTDNQPDAE KTQQGVAGER QWWVNDLGAK HDLLRGGLCW
GHMPRHLVEQ DLAKGLLVEL QRRAWHMRAL TFMISQRRGY SFSECETQLV ELLGHRHLVL
KGGKAKVSVT RGR
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