Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_6794 |
Symbol | |
ID | 6181746 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010553 |
Strand | + |
Start bp | 296118 |
End bp | 296525 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641685538 |
Product | hypothetical protein |
Protein accession | YP_001812443 |
Protein GI | 172064793 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1664] Integral membrane protein CcmA involved in cell shape determination |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.144647 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCCA AAACCATCAA CGTGACGCTG CTGGCCACCG GCCTGGTCGT CCAGGGCGAT CTGATCCTCG ACCACGGGAT GAGCGCGTTC GCACTCGTGA GCGGCAGCAT CATCTCGACG GCCGGCCTGC TGCATATCGG GCAGGGCGGA ATGATCAAGG GCAAGGTGCA AGGCGAGATA GTACGCATCG ACGGGGTCGT GGAAGGCGAT GTCCACGCCC GCGAAATGCT CGAGATCAAC GGCGTTGTGA AGGGCAACGT CTACTACTGC GGCACGATCC GGCTCGGGCC GCACGCCGCG CTCAACGGTC AGCTCAAACG CGTCCCGCGC GAATTGACCA TTGAAGCGCC GACGGCCGGC GCACCGCTCA CCGACGACAC CAATACCACT GCTCTCCCAA CGTCATGA
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Protein sequence | MKPKTINVTL LATGLVVQGD LILDHGMSAF ALVSGSIIST AGLLHIGQGG MIKGKVQGEI VRIDGVVEGD VHAREMLEIN GVVKGNVYYC GTIRLGPHAA LNGQLKRVPR ELTIEAPTAG APLTDDTNTT ALPTS
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