Gene BamMC406_6794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_6794 
Symbol 
ID6181746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010553 
Strand
Start bp296118 
End bp296525 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content63% 
IMG OID641685538 
Producthypothetical protein 
Protein accessionYP_001812443 
Protein GI172064793 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1664] Integral membrane protein CcmA involved in cell shape determination 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.144647 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCCA AAACCATCAA CGTGACGCTG CTGGCCACCG GCCTGGTCGT CCAGGGCGAT 
CTGATCCTCG ACCACGGGAT GAGCGCGTTC GCACTCGTGA GCGGCAGCAT CATCTCGACG
GCCGGCCTGC TGCATATCGG GCAGGGCGGA ATGATCAAGG GCAAGGTGCA AGGCGAGATA
GTACGCATCG ACGGGGTCGT GGAAGGCGAT GTCCACGCCC GCGAAATGCT CGAGATCAAC
GGCGTTGTGA AGGGCAACGT CTACTACTGC GGCACGATCC GGCTCGGGCC GCACGCCGCG
CTCAACGGTC AGCTCAAACG CGTCCCGCGC GAATTGACCA TTGAAGCGCC GACGGCCGGC
GCACCGCTCA CCGACGACAC CAATACCACT GCTCTCCCAA CGTCATGA
 
Protein sequence
MKPKTINVTL LATGLVVQGD LILDHGMSAF ALVSGSIIST AGLLHIGQGG MIKGKVQGEI 
VRIDGVVEGD VHAREMLEIN GVVKGNVYYC GTIRLGPHAA LNGQLKRVPR ELTIEAPTAG
APLTDDTNTT ALPTS