| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6786 |
|---|
| Symbol | |
|---|
| ID | 6181738 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010553 |
|---|
| Strand | - |
|---|
| Start bp | 287260 |
|---|
| End bp | 289581 |
|---|
| Gene Length | 2322 bp |
|---|
| Protein Length | 773 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641685530 |
|---|
| Product | putative ATPase involved in DNA repair |
|---|
| Protein accession | YP_001812435 |
|---|
| Protein GI | 172064785 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0419] ATPase involved in DNA repair |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.732843 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCCGT TGAGATTGCT CCTCGAGGGG TTCTATGGGG TACGAGACGG GATGAAGCGC
GACTGCGTCG AACTCGATCT CGAGTCCTTG CCTCGCGGGC TGATTGCGTT GACCGGCCCG
AACGGTGCCG GGAAGACGAC GATCATGGAC AACCTACATC CGTACCGGAT CATGCCGTCG
CGCGCATCGA AGCTGTCCGT CGATGCGTTT TCCTATTGGG ATCACATCTG CGGTGTCCAG
GCGCGCAAGG AGTTCGAGTG GGAGCACGAC GGTATCCGCT ATCGCTCGAC CTTCGCGTTT
CGCAAACCGG GTAAAGCCGG TAAGGCGGAC TACTTCCTGT TCTATCGCTC GATGGACGGG
GAGTGGCGCC CGGTGACGTT GCCGGAGGGC ACGGTGTCGG ACGGCAAGGG CGAGACCTAC
GACCGTTGTG TCGAAGCGAT CTGCGGCTCG CTGGAATCGT TCTTTACCAG CGTGTTTTCC
GCGCAGAACC GGCGGCCGCT CGCGTCCTAC GGCGCGAACG AGATCAAGAC GCTGCTCGCT
GAGTTACTCA AGATCGACCA TCTGCGTGCG TTGGCCGCGA AGGCGGCCGA CGTCGCCAAA
GTGCTGGCCA GGCGTCTGGA TGCCGTGCAG CAAGACGTTG TGGCGTTTGC CGGCAAGCGT
GAGCGCGCCG ACGAGACGCG CAAGTCGATC GAAGCGGATG CCGTGGCAAT TGTCTCGGCG
CGCGCCGAAC GGGAGTCGGT GCAAACCGTG CTCGCCGGCC TGATGCAGCA GTGTGCGACG
CTCGTGGCAA AGCAGGGCGA GAACGCGGGT GTCGAAGCAC GACTGCGCGA ACTCAACGTG
CGGCGCAATG AAGTGGCTAC GTCCCTGCAA GGCATCGAAC GGGATACGGC GGCGGATCAG
CAACGTTTCA TGCAACGCCG CGCCGCGATC CGCACGACGA TGACGGGCCA CGAAGCGGTG
GTGAAGCAAC GCGACGCCAT TCTTGGTGCG GCTGCCGCGA GGGACGAAGC ACAGCTTCGC
GTCTCACAAC TGGAAGCGCG ATTCGGGCCA TTGCAGCAGG CCATCGCCGA CATGGATGCG
AAGCAGCTTC GGCTGGCGAC GGTCCAGTCT GCGATGACCG GTCTCGAATC GGAAGGCGCG
ACCAAAGCCG AGTTGCTGAA GAACCTGCAG GGGCAAGCCG CTGTCGTTGA GTCGGTGCCG
TGCGCCGGGA TGGAGATTCA CGCCACGTGC CCGTTGCTCG TGCAAGCGCG CAATGCAGCA
CAACAGGCGC ACGTTCAGAC CGTTTCCCTC AAGGATCTCC GGGCCCGCTA CAAGGCGCAG
AGGGACGAGC GGGATGTTCT CGCGCCGGCA ATCGCATCGC TGTCCGCGAA ACGCGCTGAC
CTTCAGCAGG TGAGCGCCAG TATCACGGCG GCACGACAGG CATTGCAACG TGCGACGGAC
CTGGCGGCTC GCAAGCCGTT GCTGGATGCG GCAGATGCGG GGCTGGCGAC GGCGCGCGCT
GAGCTTGCCG CGCTCGACGT CGAAGACAGT GAAGCCCAGA AACGTCGTGA GACGGAGATG
GGCCGGTTGG CTGCACTGTC GCGTGAGATC GAGACGGAAA TTGCTCGTCT CGTCGCAGTC
GACGTCACTC AGGCAATCGC GGATGTGGAC CGGCAGATTG CATCGCACCG CGACGCAGGC
ACGGCGCTCG ACGCGCGGAT CGAAGCGTTG ATTCGCAGTC AGGCAACGCG CGAAACCGAG
CTTGGTTCGC TGGAACGTGA ACTAGGCGGC CTGGCGGCTA CGCGGTCGCT GGCGGCGCGC
ATCTCGGACG AGATCGCGCA CTGGAAGCTG GTGGCGAAAG CCCTCGGCAA CGACGGCGTA
ATTGCGTTGA CGATCGACGA TGCCGGTCCC GCCCTGACGA GGACGGTGAA CGACCTGCTG
CTTGCGTGCT ACGGCATGCG ATTCACGGTC GAGATCCAGA CACAGCGTGC GCTCGCGAAC
GGCGAACTGC GTGAGGGCTT CGAAATCCTC GTGCACGACG CCGACAGCGA CAGCAGCAAA
TCGGTCGGGG TCATGTCCGG TGGTCAGAAG GTCTGGATCA ACGAGTGTCT GACGCGCGGT
ATTGCGTTGT ATATCGCGGG AAATGCGAGC CAACCGTACC AATCGCTGTT CAGCGACGAG
TCGGATGGAC CGCTGGATCC GCAGCGCAAG GTGCAGTTCA TGAGGATGAA GCGGGAGGTG
TTGAAGCAGG GCGGTTACGA GCGGGAGTTC TTCATCTCGC AGACGCCCGA GCTGATCGCC
GAAGCCGATG CAGTGATCGA TGTAGCAGCG CTTGCTCAGT AG
|
|---|
| Protein sequence | MRPLRLLLEG FYGVRDGMKR DCVELDLESL PRGLIALTGP NGAGKTTIMD NLHPYRIMPS
RASKLSVDAF SYWDHICGVQ ARKEFEWEHD GIRYRSTFAF RKPGKAGKAD YFLFYRSMDG
EWRPVTLPEG TVSDGKGETY DRCVEAICGS LESFFTSVFS AQNRRPLASY GANEIKTLLA
ELLKIDHLRA LAAKAADVAK VLARRLDAVQ QDVVAFAGKR ERADETRKSI EADAVAIVSA
RAERESVQTV LAGLMQQCAT LVAKQGENAG VEARLRELNV RRNEVATSLQ GIERDTAADQ
QRFMQRRAAI RTTMTGHEAV VKQRDAILGA AAARDEAQLR VSQLEARFGP LQQAIADMDA
KQLRLATVQS AMTGLESEGA TKAELLKNLQ GQAAVVESVP CAGMEIHATC PLLVQARNAA
QQAHVQTVSL KDLRARYKAQ RDERDVLAPA IASLSAKRAD LQQVSASITA ARQALQRATD
LAARKPLLDA ADAGLATARA ELAALDVEDS EAQKRRETEM GRLAALSREI ETEIARLVAV
DVTQAIADVD RQIASHRDAG TALDARIEAL IRSQATRETE LGSLERELGG LAATRSLAAR
ISDEIAHWKL VAKALGNDGV IALTIDDAGP ALTRTVNDLL LACYGMRFTV EIQTQRALAN
GELREGFEIL VHDADSDSSK SVGVMSGGQK VWINECLTRG IALYIAGNAS QPYQSLFSDE
SDGPLDPQRK VQFMRMKREV LKQGGYEREF FISQTPELIA EADAVIDVAA LAQ
|
|---|
| |