| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6779 |
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| Symbol | |
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| ID | 6181731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010553 |
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| Strand | + |
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| Start bp | 281214 |
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| End bp | 282143 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641685523 |
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| Product | integrase family protein |
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| Protein accession | YP_001812428 |
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| Protein GI | 172064778 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGATC CGACTCTCTG GCTGTCGGCA CCGACCGAGG CCTACCAAAA ATGGCAACGC
AATGAGGCCG CCGGTGCCGA TCGGCGGGTT TTCTCGCCGC GGTCGATCGT CCAGCACGAA
GCCATGTTCG AGCGCTTCAT GCGACACCTC GAGGCGGCTC AGCGCACGCT GGCCACCTTC
GGCCCCGATC ATCTCGAATC CTTCTTTGTC GACGTCGATC GACGGTGCAA GCCGGGGACC
ACGACCCGCC TGCGCTACCA GAAACTCCTG GACCGACTCG GTCGTCACCT CGTCGACGTC
GGTGTGCGAC AAACCAATCC CGCCGCCGTC TATACGCTCA CGCAGACGTG GCCCGAGGAC
GAACCCACGC CGGTCTACCT CCTCGAAGCC GATGATCGTC GACTGCAGGA GACCATCATC
GCGGTCGACG GGCTCGACGA TCGCGCGTCG CGAAACCGTG CGATCGTCGG CTTGCTGCTG
TCGACAGGCA TCACCGCACA GGAGATACGT CAGGCGGCCG CCGTCGACCT CGATCTGGCG
CCGGCACGCC CACATATCCT GATTCCCAAA CGGGGCGCGC GCGAAGCCCG CCGCGTCAAC
GTCGACGGGT TTGCAGTACC GGCGCTTGTG CGTTGGCGAA ACTGCGCGGC GGCCGCCGTC
AGTCCGTTGC TATTCCCATC GCCGCGGGCC GGCGGCCTCA TGACCGACGA GATGCTCGGC
CGCATCGTTC GGGACGAACT CCTTGCGATC GACGTTCGGC TCCCCGATAT GAGCCCACGT
ATGCTTCGGA ATACGTTCGC ACGGCGCTTG TTGCTCGCCG GTCGGAGCAA CGACGACGTC
ATGCAGATGA TGGGACTCTC CAGCCAACGG ACCGTGATCC GCATCCGCGC GACGCTGCCA
TCGAGTCCGC AAACAGCCGA CACGACTTGA
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| Protein sequence | MDDPTLWLSA PTEAYQKWQR NEAAGADRRV FSPRSIVQHE AMFERFMRHL EAAQRTLATF
GPDHLESFFV DVDRRCKPGT TTRLRYQKLL DRLGRHLVDV GVRQTNPAAV YTLTQTWPED
EPTPVYLLEA DDRRLQETII AVDGLDDRAS RNRAIVGLLL STGITAQEIR QAAAVDLDLA
PARPHILIPK RGAREARRVN VDGFAVPALV RWRNCAAAAV SPLLFPSPRA GGLMTDEMLG
RIVRDELLAI DVRLPDMSPR MLRNTFARRL LLAGRSNDDV MQMMGLSSQR TVIRIRATLP
SSPQTADTT
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