| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6755 |
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| Symbol | |
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| ID | 6181660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010553 |
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| Strand | - |
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| Start bp | 241490 |
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| End bp | 242668 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641685501 |
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| Product | integrase family protein |
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| Protein accession | YP_001812406 |
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| Protein GI | 172064756 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGGTACG TGTGCGCCAC CGAGGAGTTC GTCTTCGCCG GACGACCGCG GCCGGGATTC
CCCTTAATCC TCGATGAGTC GATGGAACCG GCGCAGCCGT TCCACGACTA CTTGCTGTAC
CGGTTGCTTG AGCGTGGCAA GGCGCTGGAT CCCAAGACTT GGGAGGCGTA TGGGCGCCGG
CTATGGGATT TCGCCCGATT TCTTCAAGCG AACGATTGGA GCTGGAACGA TCCATTCACG
TCGGTCGGGC AGAGCGTCGT GCGTGTCTAC CGCGACTGGC AGGCTCAGGA CCTCAAACTG
GACCCGGCAA CTGTCAACGG CAGGTTGAGG TTGGTTGCGG CGATGTACCA GTGGGCACAT
GAGCGCGGGA AGATCGACCG CTTGCCTTTC GGCTACGCCG ATATCGCCGT GTACGGCATT
GAGGATGACC TGACCCATGT CACTGGCGGT CGTAAGACGT TCAGCCGTCC GGCAGTGCTG
CTCAACGAAT GGGACAAGGA ACCTGCGTTC CTGACGGTCG AGCAACTGAA GATCGCGCGG
CAATCGATAC GCTCTGCATC GCAGCTGCTG CTGTTTGATC TGATGGCGCG GGTTGGTCTG
CGCTCAGTCG AGGCACGCAC CTTCCCTCTG TCGTACGTGT TTGATCCCAG TGCCCAAAAG
GCTCTGAAGC CAGGCACCTT TATCGACGTG CGCCTCGACC CGCGGGACAT GGAGATCAAG
TTGAACAAGG CCCGGGTCGT GCACGTGCCA TACAGCCTGA TGGAGGACAT GTACGCATAC
ACGACATACG AGCGCAACGG TCTCGTAGGC GCGGTGGGGC GCAAGGAACT GGTCCTGACG
ATCCACGGCC AGTGCTACAG CAAGGAATCC GCGGTGAAGG TCTGCACGGA TCTCAGCAAC
CGGGTCGGCT TCCGGGTGCG CCCGCTCATG CTGCGTCACA GCTACGCGAT CCATACCCTG
CTTTTGCTGC GTAGCCGTCC CGAGATCAAG CTCGAGCCGC TCATGTACGT CCGCGATCGC
CTCGGCCACG CGAGTGTCCA AACCACAATG GTGTATCTGC AGCAGATCGA GCGGCTGCTG
GGCGCCGAGG CGCTGGCGAT GATGGACGAG TTTGATCGGC TCTACGGGGT GAGCAAAGCC
CTGGCCTCGG CGCCGCAGGT ATCCACCCTT GATCCTTGA
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| Protein sequence | MRYVCATEEF VFAGRPRPGF PLILDESMEP AQPFHDYLLY RLLERGKALD PKTWEAYGRR
LWDFARFLQA NDWSWNDPFT SVGQSVVRVY RDWQAQDLKL DPATVNGRLR LVAAMYQWAH
ERGKIDRLPF GYADIAVYGI EDDLTHVTGG RKTFSRPAVL LNEWDKEPAF LTVEQLKIAR
QSIRSASQLL LFDLMARVGL RSVEARTFPL SYVFDPSAQK ALKPGTFIDV RLDPRDMEIK
LNKARVVHVP YSLMEDMYAY TTYERNGLVG AVGRKELVLT IHGQCYSKES AVKVCTDLSN
RVGFRVRPLM LRHSYAIHTL LLLRSRPEIK LEPLMYVRDR LGHASVQTTM VYLQQIERLL
GAEALAMMDE FDRLYGVSKA LASAPQVSTL DP
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