Gene BamMC406_6754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_6754 
Symbol 
ID6181659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010553 
Strand
Start bp239574 
End bp241475 
Gene Length1902 bp 
Protein Length633 aa 
Translation table11 
GC content63% 
IMG OID641685500 
Producthypothetical protein 
Protein accessionYP_001812405 
Protein GI172064755 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAGAA CGAAGAACTA TAACGTCAGC GAGAATCGCG CCGCGTCGGT CGGCGCCACA 
TCGGCATCAC GCGAATCGCC GAGGCTCAGC GCCGACGACG CCTGCATCGA CATGGTGACG
CTGTTGGGGC GAGAGGCCCG CTTCCCTCAG AGAATCAAGA CGCTCGACCT TCGTGACTGG
CTGGGACGTG GCATCGACGA CTGGGTGTGC TCATCCGGCT TCTGCCTCAA GACGATGCTG
CTCTCTGGCG CGCGTGCGAC AGCCTCCGTC ACTACCTACT TCGGGCAAGT GCATTACCTG
TTCGAGTACC TCACGAGCAG TTCGCAAACA TTTGTGTCCC CGAGGCCGAA GCTCCCGTCG
GACCTGTCTC CGCAGCATGT CCAGCACTTC ATCGGCTGGC TGCAGAAGCG GGCGCAGGCT
GCAGACTGGA GACCGAGTTC GACGTGCAAT ACTTACCGGG CCGTCAAGGC CGTACTCACT
GAAATGTTCG CACAGGGCTT CATCGAGGGT GAGCCTTCGC GCTTCTTCCG GCACGGTGCG
TTACCGTGGA GCTCCGAAGA CAGTCTGCAG ACTAGCCTGA GTGACGCGGA GCAAGAGCGC
CTGGCCAAGG CTATCAAGTC CGATCTCGTT GACGTTCACC ACGGCCGCCT GCCGCTGAAG
CAAGGTGCCG TGCAGGGTCT CAGGCTATTG CTGGTGGCGC ACCGCCAGGG GCTCAACCCG
ACGCCCCTGC TCGAGATGTG CCGTGACGCG TTGGCGCCGG GATTCCTGCC TGGCACGATC
CGCGTGCGCA CTGCCAAGCA CCGCAGCAAA AAGGTTCGTT CCAGTATCGG CCGCGCCGCT
CTTGAACGGC AAGCGCCAAC TCAACCGAGC GAGCCCCCCG CCGAACAAGA CCTTTGTTTC
GACCTCTCCG AAGGCGCTGT GCTGCAGCAA GCCATCGCAA GCACCCGCGA GCTGGTGTGT
GAGGCGCCAC CCGCCCTGAA GCAGCGAATC TGGTTGTATC GCGCCGAAGC AAGTGCAGGG
TCGACAAAGA GGGGCAACAT CACCTGCCTC GACAGCAAGT CTCTCAATCG GGCCATCCAA
GGCGTCATCC AACGCCACAA CCTGCTGGGA GACGACGGCC TACCGTTGCG ACTCAATCTT
AGTCGCCTAC GCAAAAGCCG CTTCGACCGC GCACTGCGTA CCGCCGACGG CGACATAGCG
ATCACCGCCA ATCTGATGGG TAACACGCCG AGGGTCGCCG GGGCGAACTA CCCGTCGATG
AACTCGGCGC GCAAGGCCGA TGCGGCGAGC TTCATGAACG GCGACTACAC TGCTTTGATG
CGGACCGAAG GTCAGGCTCC GAGCGGGCCC GAGATCCAGC CAGTGCAAGT GCGACCCTTC
AAGCTCGGCA AAGACGGCGC AAGCGCCTTG CCGACTCAGA CGCCGGTCTC CGCGTGCTCG
GATTCGATCA GTGGCGAGCA CGCGCCGAAT GACGGTCACA GCCACTGCGA CCGCTACGTC
ATGTGCTTGT TCTGCTCGAG CTTTGCCATC GTCGGCACGG TGGACGAACT CTGGCGCCTG
TTCAGCTTCC AGATGTTCGC GCAAGCCGAA CTTGACTACC TTGACGAAGC CCTGGGTGCG
GAGCGCACGG CCGACGGCAT GCTCGAGGAC CTGCGTGATC GATACCGGGT GGCCATACCC
TATATCGACG ATTTCACTCA GCGCCAGTTC GCGCGCAGCG GGGTCGCGCA GGCTCGTGCC
AGGACCGCCT CGGGCCTGCA CCCCTACTGG CAGCACCAGA TGACCATGAG TCGCCGCGCA
CGCAGCCGTG TCTTAGCGCC GGAACCGCGC GATGACGAAT CGCAGAGCGA CGCTGTCGGA
CTGCAAGCTC GCAGAACGCG CCGGGCAGGA CCAAGGGCAT GA
 
Protein sequence
MGRTKNYNVS ENRAASVGAT SASRESPRLS ADDACIDMVT LLGREARFPQ RIKTLDLRDW 
LGRGIDDWVC SSGFCLKTML LSGARATASV TTYFGQVHYL FEYLTSSSQT FVSPRPKLPS
DLSPQHVQHF IGWLQKRAQA ADWRPSSTCN TYRAVKAVLT EMFAQGFIEG EPSRFFRHGA
LPWSSEDSLQ TSLSDAEQER LAKAIKSDLV DVHHGRLPLK QGAVQGLRLL LVAHRQGLNP
TPLLEMCRDA LAPGFLPGTI RVRTAKHRSK KVRSSIGRAA LERQAPTQPS EPPAEQDLCF
DLSEGAVLQQ AIASTRELVC EAPPALKQRI WLYRAEASAG STKRGNITCL DSKSLNRAIQ
GVIQRHNLLG DDGLPLRLNL SRLRKSRFDR ALRTADGDIA ITANLMGNTP RVAGANYPSM
NSARKADAAS FMNGDYTALM RTEGQAPSGP EIQPVQVRPF KLGKDGASAL PTQTPVSACS
DSISGEHAPN DGHSHCDRYV MCLFCSSFAI VGTVDELWRL FSFQMFAQAE LDYLDEALGA
ERTADGMLED LRDRYRVAIP YIDDFTQRQF ARSGVAQARA RTASGLHPYW QHQMTMSRRA
RSRVLAPEPR DDESQSDAVG LQARRTRRAG PRA