| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6744 |
|---|
| Symbol | |
|---|
| ID | 6181649 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010553 |
|---|
| Strand | + |
|---|
| Start bp | 231088 |
|---|
| End bp | 231879 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641685490 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001812395 |
|---|
| Protein GI | 172064745 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2135] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGCTATT CCGCAAAGAT CCAAGCCAAC TACCGGGAGT ACGTGCGGCG CTACGGCGCC
GATATGGACA TCGATACGTT CCGGTGCCTC TACTTTGCGC GCGCAGCGTC TGGCGACATC
AAGATCCCGA AAGCGGTCGA CGCCGCGTTC GCTGGTGTTG ACGACGAAAT CAATGCGGCG
ATCGCCGCGT ATCGAAACCA GCGAACACAG AAGCTGGAGA CCGAACTGTT CGAGCAGCGG
ACGCGGCTGG CGGCCGCTGA GAAGAAGCTG ACCGAGAAGA TTACGAAGAA GGCGAGCGAG
GACGTCCGGA TCGCGACCGA CAAGATCACT GCCGCGACGC GCGGGCTCGA CGATCTCCGT
CGGCAGGACC TGCAGGAGCG CGATTCGCGG ATCTTCCCCG GCTGGTATGC ACCCGTGCTG
ATCGAGCATG AAGGCAAACG CCTGGTCGTG CCGATGCGGT ATCGATGCCG CATCCCAGGC
TGGACTGAAG CGGACGAGCG TACCAAAAAT GGTTCATATA ATGCGCGCAC AGATTCACTC
AGCACCGCCT GGCGCAAGGT TTTCGGCTTC ACGCATGGTC TCGTGCTCGT CGACGCTTTT
TTCGAAAACG TGAAGCGCGA CGGCCAGAAC GTCGTGCTTC GCTTCGACCC GACGCCCCCG
CAATACATGC AGGTCGCCTG CCTGTGGACC CGCACCGAGA TCCCTGGCGC CGACGATTTG
TGGTCGTTCG CGGCGATCAC CGACGACCCA CCGCCGGAAG TCGCGGCAGC TGGCCACGAC
CGGTGCATCT GA
|
|---|
| Protein sequence | MCYSAKIQAN YREYVRRYGA DMDIDTFRCL YFARAASGDI KIPKAVDAAF AGVDDEINAA
IAAYRNQRTQ KLETELFEQR TRLAAAEKKL TEKITKKASE DVRIATDKIT AATRGLDDLR
RQDLQERDSR IFPGWYAPVL IEHEGKRLVV PMRYRCRIPG WTEADERTKN GSYNARTDSL
STAWRKVFGF THGLVLVDAF FENVKRDGQN VVLRFDPTPP QYMQVACLWT RTEIPGADDL
WSFAAITDDP PPEVAAAGHD RCI
|
|---|
| |