| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6672 |
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| Symbol | |
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| ID | 6181561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010553 |
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| Strand | + |
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| Start bp | 168180 |
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| End bp | 169838 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641685420 |
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| Product | OmpA/MotB domain-containing protein |
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| Protein accession | YP_001812325 |
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| Protein GI | 172064675 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.263605 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATGTTC GATCGATGAA GGAGAGGGCG CTGGTTTGGA TCACGACGCC GGTATTCGTA
TTCGGCTGCG CGTGGGCACT CGCCGAGCTG GGTGAATGGT GGAGTGCAGC GATCGTTTTG
CTGCTCGTCG CGTTGGCCGT CTGCATCTCC GGCTGGTACG AGCGCCGATG CGCGACGCGT
GCGGTCGGCG CCGAATCCAC CGACGCACTC GGCAACACCC CACGAGAACT CGCGGTGATC
GTTGTCGTTG GGCCGTATGC CGCGAGCTTG TTTCCGCGCG ATGCGGGACG GACTATGCTT
CGGCGAGATG ATCGGGCGGT GTGGCTGTTG GCCGATACGC CGGCGCGGCT TAGCAGCGTC
ATGACGCAGG TAAAGGCGTC GCGGGGCCGT TTTCCGGACG CCGCGTTGCT GCCCGTGGTG
CCGGAAGGCG ACGACGAAAG CGCGCTGCGC CGTGAGTTTG CACATTGGCG TATCGCGCTG
CAGGGGTCGT ACTGCCATCC GGAATGTGTG TTGCCTTGCC ACGTCGCCGT GTATGGATGT
TTGGGCCCCG CCGAAGATAA GATGCCGCAG ACGCGATGGT TCGGCGATCC GGTCGACATT
GACGTACAGC GCGTCGAGAA TGCCATGCGG CCTTATGACC GGCTGCCGGC GATCCGTCGT
CAGCTCGCGG CGTCGCGGCA GCCGAGTGCG GTGATGCGGA GCGCGCTCGG GCTTGCGGTG
TTCGATTGGC TCGACGAGGC CGCATTGTTG TCGTCTATTT CCACACTTGC GAATGCGGCG
CCGTTCGCGC TGCGCGGCGT GTCGCTGGCT GACGTCGGCT ACATGTCGGT CCGGCCGGGC
GCGTGGACGC GCTGGCTCAT TGCCAGAACG GGCCTGCAGC CGCGGATCAC GAAGCCGCTG
ACGGGGCCGC TCCCGCTGCC GTTCGTTCGC GCATCGAGGC CGCAAGTCGA CGCGCGGCGT
AGCGCACTGC TGTCGCGTAG CCGCGCATGG CCGCTTGGGT TGCACGTCCT GCTGTCGAGC
GTGGTAGCGC TGACCGCGAC GGTGGCGATA TCGGGCTGGA CGAATTACCG GATCGTCGAG
CGCATCGCGG GCAACTTGTC TGCCTACCGG AACACGCCGG GAAACCGGAT CACCGCGAAG
GTCGACTCGT TCGAGCGGCT GCGCGCAGAT CGCGACGAAG TAGCGCGCAA TTTGCGCGAC
GGCGTGCCGT TCGGAGCGGG TTGGGGCCTG TATCCGGGAC GCGCGTTGTT GGTCCGTCTC
AATGCTGGGC TTGCGGGCTA CCGGCCGCCG CTAACGACTG TGCAAATCGA CAGCCTTTCG
CTGTTCGCAA GTGGCAAGGC GACCTTTTCC CCGGAGGCCG CGCATCGCGA ACTGGCGCAT
GCGCTGCAGC TGATCCAGGC GAACCCTGAC CAGCGCGTGC TAATCGAAGG ACACGCCGAC
AGTGAAGGAT CGCCTCGCGC GAATATCCTG CTATCCGAAG CTCGCGCCCG TGCAATCCGC
GATTGGCTGG CGGCCAAAGG CGGATTGTCA GTCGCCCGTT TCGCGATCCA GGGGTTGGGC
GACGTCAGGC CGATTGCGGA CAACAGCAGC GAAGCCGGGC GGGCACTGAA CCGGCGCGTT
GACGTTTCCC TCTTTCCTGA TAGCACCCTG CGCCGATGA
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| Protein sequence | MNVRSMKERA LVWITTPVFV FGCAWALAEL GEWWSAAIVL LLVALAVCIS GWYERRCATR
AVGAESTDAL GNTPRELAVI VVVGPYAASL FPRDAGRTML RRDDRAVWLL ADTPARLSSV
MTQVKASRGR FPDAALLPVV PEGDDESALR REFAHWRIAL QGSYCHPECV LPCHVAVYGC
LGPAEDKMPQ TRWFGDPVDI DVQRVENAMR PYDRLPAIRR QLAASRQPSA VMRSALGLAV
FDWLDEAALL SSISTLANAA PFALRGVSLA DVGYMSVRPG AWTRWLIART GLQPRITKPL
TGPLPLPFVR ASRPQVDARR SALLSRSRAW PLGLHVLLSS VVALTATVAI SGWTNYRIVE
RIAGNLSAYR NTPGNRITAK VDSFERLRAD RDEVARNLRD GVPFGAGWGL YPGRALLVRL
NAGLAGYRPP LTTVQIDSLS LFASGKATFS PEAAHRELAH ALQLIQANPD QRVLIEGHAD
SEGSPRANIL LSEARARAIR DWLAAKGGLS VARFAIQGLG DVRPIADNSS EAGRALNRRV
DVSLFPDSTL RR
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