| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6671 |
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| Symbol | |
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| ID | 6181560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010553 |
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| Strand | + |
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| Start bp | 167500 |
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| End bp | 168183 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641685419 |
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| Product | hypothetical protein |
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| Protein accession | YP_001812324 |
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| Protein GI | 172064674 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3455] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03349] type IV / VI secretion system protein, DotU family |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.133048 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACATCCG ACAGTTTAGG CGTCGCGTTG AGCGCGTCGC TGCAAGATAC AGTGCTACAC
ATCGCTTTGC TCGCGCAGGG CGCGCCGATT CCGGAAATCC ATGTTTGGCG TGCGCGTTGC
ATTGGGCTCG TCGAGCGACT CGCTCAAGCG ATGTACGACG ACGGTTGGGA AAGCGACGTC
GTGCGTGACG TCGGCCTCGC GCAATGCGCG TTGCTGGACG AGGTCACGTT CCACTACCTA
CCGGTGGGCC GCCGGGACCA GTGGATGCGC GAGACAATGC TATTCCGCTT TCATCGCCTA
CACAGCGGTG CGGACCGGAT TCGGGCGCGA GTCGACGTGC TGTTGAACGC GGTGCATCCA
GATCAGAGTC TACTGGATAT GTATGCGACC CTATTCGAGC TCGGGCTGCC GCACGAGCGC
GACGAGTTTC GAGACCGTTT GAGTATGGCG CGTCGCGTCG CATCGTCGGT CGATTCTAGT
GCCGACGGCG CGTGGGTCGC GCCGACGTCG TCGTGCGCCA CCGTTCCGGT GGGCGGGTGG
CTGTCGCTTC GATGGGGGCT GCTCGCGGTG GCGCTGCTGG CGGGCGTATG GCTCGCCGTC
GACATCTCGT TGCGGCATGC GGTGGAGCGC TTGCCAGACT TGGGCGCGGG CGTCGCTCAC
GACGGCAAGG AGGTACGGAT GTGA
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| Protein sequence | MTSDSLGVAL SASLQDTVLH IALLAQGAPI PEIHVWRARC IGLVERLAQA MYDDGWESDV
VRDVGLAQCA LLDEVTFHYL PVGRRDQWMR ETMLFRFHRL HSGADRIRAR VDVLLNAVHP
DQSLLDMYAT LFELGLPHER DEFRDRLSMA RRVASSVDSS ADGAWVAPTS SCATVPVGGW
LSLRWGLLAV ALLAGVWLAV DISLRHAVER LPDLGAGVAH DGKEVRM
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