| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6640 |
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| Symbol | |
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| ID | 6181787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010553 |
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| Strand | + |
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| Start bp | 133876 |
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| End bp | 134832 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641685400 |
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| Product | fimbrial protein |
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| Protein accession | YP_001812305 |
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| Protein GI | 172064655 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0447531 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000000139123 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCACCTCT CATTACAACT CGTCTCGGGG CGCTTACTTA CGCGTCTACT CTTCGTGGTT
ACTCTTCTAC TACCTACAGC CGCCGGCGCA TGGTCTACAA TCCACCGCTC CCTTACCGCG
TTCGGTGGTG AATATACCGT ACCCGCGTCC ACCCCGCCTG GCACCGTCAT CGCCAGGCAA
ACGCTGCCGA TAGCTGACCT GTGTGCTCCG GGAGGCTGCA AGCTCGAATC GTACAACACC
GAACGTTCAG GCTACCCGAC GGGAGACGTC GGTTACATCC ACCCCACGTC CGTGCAAGGG
GTCGGACAAA GGCTCGTGCT CAACGGCGCC CCCCTGTACG CGATGACGAA TGGGTACTCC
GACCCGATCC GTGTCGACAA CGCGTTAGAG CTACAGCTCA TCACAACGGG TGCACCAATC
AAGAGTGCGG CGCTAGCCAG TGACGTGTAT CCCGGCGTCG TCACTAGCCT CGTCCTAACC
TCATGGATAA AGGACCTCTA CGGGACAGAA ATACGCCTCT CCGGATCGAT TCGCTCTGTC
GCTGGAACTT GCTTCGTGGA CTCTCCCACG GTCACTCTGT CGCCTATAGC AGCCGCACGA
CTACCCACCG TCGGGTCCTC CGGCGGGGGG GCAGCGTTCA CGTTAAACGT CTCGAAGTGC
CCAGCAGGGT ACAACCGAGT GGGTTATAAA CTCTCTCAAT CAGCCGTATC TCCAGCCGGG
CCGCCGGGGG TGCTGCAAGC CTCCTCGTCG TCCTCAGCCC ACGGCGTAAC CATACAGCTC
AAAGACTCGT CGGGCGCAGG GCTGGAACTC AATAGGTCCT ATCCCATAAA CGAATACAGC
AAAACCTCCG GTGGTTCATA CAATGTCAGT CTTCGCGCAG ACTACTACCG AACCGCTCCT
CAAATCACCG TCGGCTCCGT GAATGCCGAC GTCACCGTGT ATCTGGACTA TCAATAA
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| Protein sequence | MHLSLQLVSG RLLTRLLFVV TLLLPTAAGA WSTIHRSLTA FGGEYTVPAS TPPGTVIARQ
TLPIADLCAP GGCKLESYNT ERSGYPTGDV GYIHPTSVQG VGQRLVLNGA PLYAMTNGYS
DPIRVDNALE LQLITTGAPI KSAALASDVY PGVVTSLVLT SWIKDLYGTE IRLSGSIRSV
AGTCFVDSPT VTLSPIAAAR LPTVGSSGGG AAFTLNVSKC PAGYNRVGYK LSQSAVSPAG
PPGVLQASSS SSAHGVTIQL KDSSGAGLEL NRSYPINEYS KTSGGSYNVS LRADYYRTAP
QITVGSVNAD VTVYLDYQ
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