| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6636 |
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| Symbol | |
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| ID | 6181783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010553 |
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| Strand | + |
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| Start bp | 128548 |
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| End bp | 129096 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641685396 |
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| Product | fimbrial protein |
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| Protein accession | YP_001812301 |
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| Protein GI | 172064651 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000000143091 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000000158442 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGATCTCTA AAAAAGTCAC TCTCCTCAGT GCAGCAGTGG GTGCCGCGTT CGTGGGTGTA
TTTTCGCTTT CCGCGCCGGC GCACGCTGCG GACGGCACCA TTACATTCAA CGGAAAAGTC
ACAGCCGCTA CTTGTACGGT TCAGGCTGGA AAGGGCGATT TGACTGTGCA AATGCCTACT
GTTTCTGTCT CCGCCTTCAA AGCAGATGGT GACGTGGCTG GGAGTAAGCC TTTCACCATC
TCGTTCTCCG GATGTACGGG GGATGCTTCG ACGGTGAAGG TTGGTTTCGA GTCGGGGGCA
AACGTTGATC CGGTGACAGG GCGCCTAAAG CTTAACGGGG CCGATGCTGC TAAGAATCTC
CAGCTGGGCC TTTACAACGG TGACAGCTCG AAGATCACGA TCGGCGACAG TGCAACAGTA
AAGGGTGTGT CACTTGCTAG CGGTAGTGGC ACGGTGCTCT ATATGGCCAA GTATGTGCAG
ACGGGCGCCA CGGCTGTAAA GGCTGGTAAC GCCAATACCT CGGTGACGTA CTCCCTGATC
TACGAATAA
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| Protein sequence | MISKKVTLLS AAVGAAFVGV FSLSAPAHAA DGTITFNGKV TAATCTVQAG KGDLTVQMPT
VSVSAFKADG DVAGSKPFTI SFSGCTGDAS TVKVGFESGA NVDPVTGRLK LNGADAAKNL
QLGLYNGDSS KITIGDSATV KGVSLASGSG TVLYMAKYVQ TGATAVKAGN ANTSVTYSLI
YE
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